RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 AZGP1P25311 298 aaKnown RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 EIF1P41567 113 aaKnown RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 KIR2DL3P43628 341 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 MAP2K3P46734 347 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 MMP15P51511 669 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 OR10A3P58181 314 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 BTG1P62324 171 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 DAB2P98082 770 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 PITPNAQ00169 270 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 PUDPQ08623 228 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 IL18Q14116 193 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SLC17A1Q14916 467 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 PLPPR5Q32ZL2 321 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SLC25A35Q3KQZ1 300 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 TRIQKQ629K1 86 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 DNM1P34Q6PK57 102 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 DEGS2Q6QHC5 323 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 FAM198BQ6UWH4 519 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 LYPD4Q6UWN0 246 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 ZNF679Q8IYX0 411 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 CELF2-AS1Q8N7Q2 184 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SAMD12Q8N8I0 201 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 ZNF248Q8NDW4 579 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 C19orf18Q8NEA5 215 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 OR2M3Q8NG83 312 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 OR5AK2Q8NH90 309 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 TRMT10AQ8TBZ6 339 aaKnown RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 RNF128Q8TEB7 428 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SLC25A43Q8WUT9 341 aaPredicted RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 HPS1Q92902 700 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 NXPE2Q96DL1 559 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SPACA9Q96E40 222 aaPredicted RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 NEDD4LQ96PU5 975 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 CDC6Q99741 560 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 C7orf50Q9BRJ6 194 aaKnown RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 WACQ9BTA9 647 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 TRAF4Q9BUZ4 470 aaPredicted RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 DEFB126Q9BYW3 111 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 APMAPQ9HDC9 416 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 SH2D2AQ9NP31 389 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 CHST11Q9NPF2 352 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 ANKRD10Q9NXR5 420 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 ALKBH4Q9NXW9 302 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 KLHL9Q9P2J3 617 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 LAMP5Q9UJQ1 280 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 WIF1Q9Y5W5 379 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 ETV7Q9Y603 341 aa9.65□□□□□ -0.86
USP4-214ENST00000491791 COL27A1Q8IZC6 1860 aaPredicted RBP9.65□□□□□ -0.86
USP4-214ENST00000491791 MPDZO75970 2070 aa9.65□□□□□ -0.87
USP4-214ENST00000491791 NBEAQ8NFP9 2946 aa9.65□□□□□ -0.87
USP4-214ENST00000491791 ACACAQ13085 2346 aa9.65□□□□□ -0.87
USP4-214ENST00000491791 IGHV1-45A0A0A0MS14 117 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 MEIOCA2RUB1 952 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 SMIM30A4D0T7 59 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 IFITM5A6NNB3 132 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 FAM25AB3EWG3 89 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 FAM25CB3EWG5 89 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 FAM25GB3EWG6 89 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GPR171O14626 319 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 TP53I11O14683 189 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 MAGEB4O15481 346 aaPredicted RBP9.64□□□□□ -0.87
USP4-214ENST00000491791 LYRM1O43325 122 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 SLC43A1O75387 559 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 AQP8O94778 261 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 UMODP07911 640 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 OR8G3PP0DMU2 310 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 AHCYP23526 432 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 DPP4P27487 766 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 DCTDP32321 178 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 DDOSTP39656 456 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 PSMB10P40306 273 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GPR85P60893 370 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GLO1Q04760 184 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 UBE2NLQ5JXB2 153 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 PHF19Q5T6S3 580 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 SLC18B1Q6NT16 456 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 KCTD18Q6PI47 426 aaPredicted RBP9.64□□□□□ -0.87
USP4-214ENST00000491791 RHOUQ7L0Q8 258 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 DPY19L4Q7Z388 723 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GLRX5Q86SX6 157 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 CDH24Q86UP0 819 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 YIPF7Q8N8F6 280 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 OR4M1Q8NGD0 313 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 OR13C5Q8NGS8 318 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 OR2Y1Q8NGV0 311 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 POC1BQ8TC44 478 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 C15orf40Q8WUR7 153 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 MCHR2Q969V1 340 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 SLC25A36Q96CQ1 311 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 C4orf45Q96LM5 186 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 RASL10BQ96S79 203 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 GFI1Q99684 422 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 PDCD1LG2Q9BQ51 273 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 MESP1Q9BRJ9 268 aa9.64□□□□□ -0.87
USP4-214ENST00000491791 FAM117AQ9C073 453 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms