RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ACTG1P63261 375 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 DHRS2Q13268 280 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 VWA2Q5GFL6 755 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 AVPI1Q5T686 147 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 USP53Q70EK8 1073 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 VN1R4Q7Z5H5 301 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 DMBX1Q8NFW5 382 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 OR1J4Q8NGS1 313 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 OR10AC1Q8NH08 325 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 GPX8Q8TED1 209 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM106AQ96A25 262 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 RBM18Q96H35 190 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 STACQ99469 402 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TRIM2Q9C040 744 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 KCNK15Q9H427 330 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF346Q9UL40 294 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 KCNK6Q9Y257 313 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 H3BSH0 61 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 CCSO14618 274 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 NARSO43776 548 aaKnown RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ACTL6AO96019 429 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 GABRA3P34903 492 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 DRD3P35462 400 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 EMDP50402 254 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TAS2R19P59542 299 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 NR0B2Q15466 257 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ATPAF1Q5TC12 328 aaPredicted RBP17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF425Q6IV72 752 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM71Q6P5X7 295 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF813Q6ZN06 617 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 PPP1R1CQ8WVI7 109 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 SEC22AQ96IW7 307 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 TLNRD1Q9H1K6 362 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 ZFP57Q9NU63 452 aa17.55■□□□□ 0.4
SNAPC3-206ENST00000490969 COL6A3P12111 3177 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 OR6C76A6NM76 312 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 LINC00587B1AMM8 73 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 SRPX2O60687 465 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 DNAJB6O75190 326 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 EIF3GO75821 320 aaKnown RBP eCLIP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 F12P00748 615 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 CMPK1P30085 196 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 ATP1B3P54709 279 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 KCNAB1Q14722 419 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 LINC00114Q6XXX2 140 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 ADAD1Q96M93 576 aaKnown RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 MNTQ99583 582 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 MYOZ1Q9NP98 299 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 EDARQ9UNE0 448 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 NOP16Q9Y3C1 178 aaKnown RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 OR2AT4A6NND4 320 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 M0QYG6 137 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 SULT2B1O00204 365 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 ARPC3O15145 178 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 FGF16O43320 207 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 FADS1O60427 444 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 SNAPINO95295 136 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 NPBWR1P48145 328 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 NR0B1P51843 470 aaKnown RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 C3orf33Q6P1S2 294 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF595Q8IYB9 648 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 ZFP82Q8N141 532 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 OR51A4Q8NGJ6 313 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 TINAGL1Q9GZM7 467 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 MKKSQ9NPJ1 570 aaPredicted RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 MYEF2Q9P2K5 600 aaKnown RBP17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 OR1A2Q9Y585 309 aa17.54■□□□□ 0.4
SNAPC3-206ENST00000490969 LRRC72A6NJI9 287 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 CDC40O60508 579 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 AKR7A3O95154 331 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 ABHD16AO95870 558 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 AMY2AP04746 511 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 ACAA1P09110 424 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 SRSF3P84103 164 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM205Q6UW68 189 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 SLC16A9Q7RTY1 509 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 FAM122BQ7Z309 247 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 GALNT16Q8N428 558 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 SMRP1Q8NCR6 262 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 RXFP4Q8TDU9 374 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 PTDSS2Q9BVG9 487 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 LHX6Q9UPM6 363 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 OR4C45A6NMZ5 311 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 AK1P00568 194 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 IGFBP4P22692 258 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 KIR2DL1P43626 348 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 CAPZA1P52907 286 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 RUNX2Q13950 521 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 EXOSC7Q15024 291 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 INPP5JQ15735 1006 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 LEG1Q6P5S2 330 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 UNQ6126/PRO20091Q6UXV3 157 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 GTPBP8Q8N3Z3 284 aaPredicted RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 ZNF676Q8N7Q3 588 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 ZCCHC10Q8TBK6 192 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 TMEM74BQ9NUR3 256 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 MBD2Q9UBB5 411 aa17.53■□□□□ 0.4
SNAPC3-206ENST00000490969 MEX3AA1L020 520 aaKnown RBP17.52■□□□□ 0.4
SNAPC3-206ENST00000490969 IGLON5A6NGN9 336 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms