RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
BRD9-209ENST00000490814 ABRACLQ9P1F3 81 aa9.29□□□□□ -0.92
BRD9-209ENST00000490814 NPFFR2Q9Y5X5 522 aa9.29□□□□□ -0.92
BRD9-209ENST00000490814 DOCK9Q9BZ29 2069 aa9.29□□□□□ -0.92
BRD9-209ENST00000490814 ARID1AO14497 2285 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3DA0A087WVF3 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3IA0A087WXS9 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3EA0A087X179 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3KA0A087X1G2 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 CXorf51AA0A1B0GTR3 108 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 A0A1B0GUH1 482 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3FA6NER0 549 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3LB9A6J9 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 GMFGO60234 142 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 ARL6IP5O75915 188 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 OR8U8P0C7N1 319 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3HP0C7X1 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 ACHEP22303 614 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 MST1P26927 711 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 CD96P40200 585 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 SNRPNP63162 240 aaKnown RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 UBXN2BQ14CS0 331 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 ATXN7L3Q14CW9 347 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 EIPR1Q53HC9 387 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3GQ6DHY5 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3CQ6IPX1 549 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 UNQ6494/PRO21346Q6UXR6 183 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 GLDNQ6ZMI3 551 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 TBC1D3Q8IZP1 549 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 SDF2Q99470 211 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TWSG1Q9GZX9 223 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 PRSS16Q9NQE7 514 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TOX3O15405 576 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 OR10H2O60403 315 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 CD2P06729 351 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 HTR2AP28223 471 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 DLX5P56178 289 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 SHC2P98077 582 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 FZD5Q13467 585 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 LRRC37A5PQ49AS3 106 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 C2orf27AQ580R0 203 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 ADAMTSL4Q6UY14 1074 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 CMIPQ8IY22 773 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 BRIX1Q8TDN6 353 aaKnown RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 SRMSQ9H3Y6 488 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 TMEM185BQ9H7F4 350 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 SPTA1P02549 2419 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 MEIS3P1A6NDR6 274 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 HIST1H2ABP04908 130 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 HEXAP06865 529 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 SDHAP31040 664 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 NPBWR1P48145 328 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 RAB5CP51148 216 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 FOXO1Q12778 655 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 CLN3Q13286 438 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 PYY3Q5JQD4 70 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 DCST2Q5T1A1 773 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 ZNF660Q6AZW8 331 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 HIST3H2AQ7L7L0 130 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 HIST1H2ACQ93077 130 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 MENTQ9BUN1 341 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 NPDC1Q9NQX5 325 aaPredicted RBP9.28□□□□□ -0.92
BRD9-209ENST00000490814 GTF2A1LQ9UNN4 478 aa9.28□□□□□ -0.92
BRD9-209ENST00000490814 F5H5P2 479 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 PLPP2O43688 288 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 FGF19O95750 216 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 F12P00748 615 aaPredicted RBP9.27□□□□□ -0.93
BRD9-209ENST00000490814 CCR4P51679 360 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 PLA2G7Q13093 441 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 AMZ1Q400G9 498 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 UQCC3Q6UW78 93 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 CLEC9AQ6UXN8 241 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 BAIAP2L2Q6UXY1 529 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 FAM71CQ8NEG0 241 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 RAB3CQ96E17 227 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 COX14Q96I36 57 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 HSPA12BQ96MM6 686 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 RNF122Q9H9V4 155 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 EXOSC3Q9NQT5 275 aaKnown RBP9.27□□□□□ -0.93
BRD9-209ENST00000490814 STARD5Q9NSY2 213 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 SLC35A3Q9Y2D2 325 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 ADAM18Q9Y3Q7 739 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 A0A1W2PPC1 479 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 IDSB3KWA1 339 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 C2CD4DB7Z1M9 353 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 PYCARD-AS1I3L0S3 204 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 RRP8O43159 456 aaKnown RBP9.27□□□□□ -0.93
BRD9-209ENST00000490814 B3GALT2O43825 422 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 GAAP10253 952 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 PVRP15151 417 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 GALP22466 123 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 ADH7P40394 386 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 CARD18P57730 90 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 BDH1Q02338 343 aa9.27□□□□□ -0.93
BRD9-209ENST00000490814 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms