RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 STX3Q13277 289 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 DGCR6Q14129 220 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 PTPN20Q4JDL3 420 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 C9orf135Q5VTT2 229 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF530Q6P9A1 599 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 FAM199XQ6PEV8 388 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ENPP6Q6UWR7 440 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 BHLHA15Q7RTS1 189 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 MRPL21Q7Z2W9 205 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 CYP4Z1Q86W10 505 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 SELENOHQ8IZQ5 122 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 CMTM8Q8IZV2 173 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ARHGAP18Q8N392 663 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 C17orf78Q8N4C9 275 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 DHRSXQ8N5I4 330 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 DCAF4L2Q8NA75 395 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 LINC01555Q8NAE3 123 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR7G1Q8NGA0 311 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 TCTEX1D2Q8WW35 142 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 KIFAP3Q92845 792 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 FAM131CQ96AQ9 280 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 MBOAT4Q96T53 435 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 SLC6A7Q99884 636 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 UPF3BQ9BZI7 483 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 NAT10Q9H0A0 1025 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 VCX3BQ9H321 246 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 LRRC19Q9H756 370 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 UCK1Q9HA47 277 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 NMRAL1Q9HBL8 299 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 DMAP1Q9NPF5 467 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ADA2Q9NZK5 511 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 BFARQ9NZS9 450 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 MYEF2Q9P2K5 600 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 CLN8Q9UBY8 286 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 WARS2Q9UGM6 360 aaKnown RBP3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF229Q9UJW7 825 aa3.29□□□□□ -1.88
HMGB1P38-201ENST00000490557 F5H6K3 240 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 GOLGA8RI6L899 631 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 AIM2O14862 343 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 MSH4O15457 936 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 TAPBPO15533 448 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZW10O43264 779 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 PSTPIP1O43586 416 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 SULT1B1O43704 296 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 PRKAB2O43741 272 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 HUS1O60921 280 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 SNAPINO95295 136 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CA1P00915 261 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 KITLGP21583 273 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 NPBWR2P48146 333 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 KCNJ2P63252 427 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CSNK1G2P78368 415 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 BASP1P80723 227 aaKnown RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 KLRC3Q07444 240 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 SLC5A12Q1EHB4 618 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 C18orf21Q32NC0 220 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 HSDL1Q3SXM5 330 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 TIGITQ495A1 244 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF658BQ4V348 819 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 TP53I3Q53FA7 332 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 XKR4Q5GH76 650 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 DMRTC1Q5HYR2 192 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF470Q6ECI4 717 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 C22orf42Q6IC83 251 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 TIFABQ6ZNK6 161 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 SLC16A14Q7RTX9 510 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 FAM220AQ7Z4H9 259 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CDKL3Q8IVW4 592 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 MKXQ8IYA7 352 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 INO80EQ8NBZ0 244 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZNF740Q8NDX6 193 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 B3GNT7Q8NFL0 401 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 OR52I1Q8NGK6 324 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 MAGEE2Q8TD90 523 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CA5BP1Q8WTZ4 195 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 TMEM101Q96IK0 257 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 JSRP1Q96MG2 331 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CLCC1Q96S66 551 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 PELOQ9BRX2 385 aaKnown RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 POPDC2Q9HBU9 364 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ZC4H2Q9NQZ6 224 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 INPP5EQ9NRR6 644 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 EURLQ9NYK6 297 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 RBAKQ9NYW8 714 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 HMGXB4Q9UGU5 601 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 CDH10Q9Y6N8 788 aa3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 COL16A1Q07092 1604 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P38-201ENST00000490557 ADCY9O60503 1353 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 PLEKHG1Q9ULL1 1385 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 FRMPD4Q14CM0 1322 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 KCNE1BA0A087WTH5 132 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 A0A1B0GWB2 263 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 M0R3G1 203 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 RAB29O14966 203 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 SIVA1O15304 175 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 AIREO43918 545 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 OR10H3O60404 316 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 RAMP3O60896 148 aa3.27□□□□□ -1.89
HMGB1P38-201ENST00000490557 ATP5HO75947 161 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms