RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 TMEM237Q96Q45 408 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 PRPF18Q99633 342 aaKnown RBP5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 PCGF1Q9BSM1 259 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 MECRQ9BV79 373 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 TRIM15Q9C019 465 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 DPAGT1Q9H3H5 408 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 NANOGQ9H9S0 305 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNRD1Q9P1U0 126 aa5.85□□□□□ -1.47
PDLIM1-203ENST00000490391 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 PLSCR5A0PG75 271 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF879B4DU55 563 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 SUPT7LO94864 414 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 AK1P00568 194 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 GUSBP08236 651 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CD28P10747 220 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 LYL1P12980 280 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF43P17038 809 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 DRD4P21917 467 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 PRPH2P23942 346 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 SLC6A2P23975 617 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 HOXD3P31249 432 aaPredicted RBP5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CRHR1P34998 444 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF75DP51815 510 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 KCNJ10P78508 379 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 FUT5Q11128 374 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 BNIP2Q12982 314 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 NAB1Q13506 487 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CHI3L2Q15782 390 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ARHGAP11BQ3KRB8 267 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 C1orf140Q5VVS0 124 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 NHLRC1Q6VVB1 395 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF841Q6ZN19 808 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 HMGN2P46Q86SG4 172 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 NDUFA11Q86Y39 141 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZNF101Q8IZC7 436 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CLHC1Q8NHS4 586 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 SFXN5Q8TD22 340 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 METTL2AQ96IZ6 378 aaKnown RBP5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 TSSK3Q96PN8 268 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CCT7Q99832 543 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 FOXB1Q99853 325 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 MRPL57Q9BQC6 102 aaKnown RBP5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 RHOXF2Q9BQY4 288 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 PTDSS2Q9BVG9 487 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 TAPBPLQ9BX59 468 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 SEMA6AQ9H2E6 1030 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 MRPL46Q9H2W6 279 aaKnown RBP5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CENPHQ9H3R5 247 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 CDH20Q9HBT6 801 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 MSL2Q9HCI7 577 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 LZTFL1Q9NQ48 299 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 ZDHHC8Q9ULC8 765 aa5.84□□□□□ -1.47
PDLIM1-203ENST00000490391 UBR4Q5T4S7 5183 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 PRAMEF27A3QJZ7 478 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 A8MVM7 634 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM178BH3BS89 294 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 EIF3HO15372 352 aaKnown RBP eCLIP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 FBXO24O75426 580 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 ZFPL1O95159 310 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 GSTA2P09210 222 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TFPTP0C1Z6 253 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 LAMP1P11279 417 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 CXCR1P25024 350 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 EPHA3P29320 983 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 WNT5AP41221 380 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 PITPNBP48739 271 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 PKNOX1P55347 436 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TNFAIP6P98066 277 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 EPS8Q12929 822 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 DCTN2Q13561 401 aaKnown RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 IMPG1Q17R60 797 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 FAM153CQ494X1 144 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 SPATA46Q5T0L3 261 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 THEM4Q5T1C6 240 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 MBNL2Q5VZF2 373 aaKnown RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 WDR25Q64LD2 544 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 SLC27A4Q6P1M0 643 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 ICA1LQ8NDH6 482 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 OR1J1Q8NGS3 322 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 OR5AK3PQ8NH89 298 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 MTERF3Q96E29 417 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 NEIL1Q96FI4 390 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 LRR1Q96L50 414 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 SAMD8Q96LT4 415 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 OXGR1Q96P68 337 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 CITED2Q99967 270 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TMEM246Q9BRR3 403 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TRIM31Q9BZY9 425 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 SIRPDQ9H106 197 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 PPA2Q9H2U2 334 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 TNFRSF12AQ9NP84 129 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 A4GALTQ9NPC4 353 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 CYSLTR2Q9NS75 346 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 CGGBP1Q9UFW8 167 aaPredicted RBP5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 MIOXQ9UGB7 285 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 BAIAP2L1Q9UHR4 511 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 POFUT2Q9Y2G5 429 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 VPS13DQ5THJ4 4388 aa5.83□□□□□ -1.48
PDLIM1-203ENST00000490391 DNAH6Q9C0G6 4158 aa5.82□□□□□ -1.48
PDLIM1-203ENST00000490391 LOC102725191A0A1B0GVB3 256 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms