RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 XKRYO14609 159 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 OR10H3O60404 316 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 NDUFB2O95178 105 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 SEMG1P04279 462 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 ATP6V1B2P21281 511 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 RRM2P31350 389 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 IFNGR2P38484 337 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 SEC23BQ15437 767 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 SLC36A2Q495M3 483 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 THEM4Q5T1C6 240 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 TMEM53Q6P2H8 277 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 FNDC8Q8TC99 324 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 NSMAFQ92636 917 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 HTRA1Q92743 480 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 HDAC2Q92769 488 aaKnown RBP11.62□□□□□ -0.55
CCL28-202ENST00000489442 CCDC124Q96CT7 223 aaKnown RBP11.62□□□□□ -0.55
CCL28-202ENST00000489442 FBXO17Q96EF6 278 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 DHRS1Q96LJ7 313 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 Q96MF0 132 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 TSPAN32Q96QS1 320 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 ALG12Q9BV10 488 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 CACNG6Q9BXT2 260 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 SPEF1Q9Y4P9 236 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 PMF1-BGLAPU3KQ54 211 aa11.62□□□□□ -0.55
CCL28-202ENST00000489442 NIPBLQ6KC79 2804 aaeCLIP11.62□□□□□ -0.55
CCL28-202ENST00000489442 IGHV2OR16-5A0A0B4J2B6 119 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 SH3PXD2BA1X283 911 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 GYG2O15488 501 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 UBOX5O94941 541 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 SLC2A10O95528 541 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 IGHMP01871 453 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 CD14P08571 375 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 PATE4P0C8F1 98 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 NPR2P20594 1047 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 CALCRP30988 508 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 OMPP47874 163 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 GALK2Q01415 458 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 PLP2Q04941 152 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 FMODQ06828 376 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 RAB35Q15286 201 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 SGCAQ16586 387 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 IQCCQ4KMZ1 466 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
CCL28-202ENST00000489442 C10orf128Q5T292 105 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 DPPA2Q7Z7J5 298 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 MYPOPQ86VE0 399 aaPredicted RBP11.61□□□□□ -0.55
CCL28-202ENST00000489442 KRTAP1-3Q8IUG1 177 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 LRRC18Q8N456 261 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 ARIH2OSQ8N7S6 290 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 LRRC75AQ8NAA5 344 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 POP5Q969H6 163 aaKnown RBP11.61□□□□□ -0.55
CCL28-202ENST00000489442 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
CCL28-202ENST00000489442 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 BDH2Q9BUT1 245 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 SMURF2Q9HAU4 748 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 CA10Q9NS85 328 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 SIGLEC7Q9Y286 467 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 ADAM18Q9Y3Q7 739 aa11.61□□□□□ -0.55
CCL28-202ENST00000489442 MGRN1O60291 552 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 KRT36O76013 467 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 FOSL1P15407 271 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZNF14P17017 642 aaPredicted RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 CDAP32320 146 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SERPINF1P36955 418 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SNRPD2P62316 118 aaKnown RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 MRPS34P82930 218 aaKnown RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 MS4A2Q01362 244 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 FHL1Q13642 323 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 DAG1Q14118 895 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 RAB39AQ14964 217 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ETFDHQ16134 617 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 NRN1LQ496H8 165 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 DNAL1Q4LDG9 190 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 LCN8Q6JVE9 175 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 KRT80Q6KB66 452 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZNF519Q8TB69 540 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ASB9Q96DX5 294 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 C18orf12Q96KH6 178 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 Q96M85 177 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZNF570Q96NI8 536 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 TRIM15Q9C019 465 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SIAEQ9HAT2 523 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 BARX1Q9HBU1 254 aaPredicted RBP11.6□□□□□ -0.55
CCL28-202ENST00000489442 NOX3Q9HBY0 568 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 CCNB1IP1Q9NPC3 277 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZNF224Q9NZL3 707 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 IL20RAQ9UHF4 553 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 ZANQ9Y493 2812 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 IQCMA0A1B0GVH7 501 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 H7C1C5 153 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 TNFRSF11BO00300 401 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 PTP4A3O75365 173 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 PTHP01270 115 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 SERPINA5P05154 406 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 OR4A8P0C604 315 aa11.6□□□□□ -0.55
CCL28-202ENST00000489442 LIMS1P48059 325 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms