RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 SLC22A23A1A5C7 686 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 FAM221AA4D161 298 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 H3BN98 237 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 CTAG2O75638 210 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 PPP1R3DO95685 299 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 RENP00797 406 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 IFNGP01579 166 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 HMGN1P05114 100 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 THBDP07204 575 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 OSMP13725 252 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 ZNF23P17027 643 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 ZNF26P17031 533 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 PRKACGP22612 351 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 PTAFRP25105 342 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 CCKARP32238 428 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 ARR3P36575 388 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 FXYD6P3P58550 94 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 MYBPC1Q00872 1141 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 RUNX1T1Q06455 604 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 KRR1Q13601 381 aaKnown RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 TBRG1Q3YBR2 411 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 PHYHD1Q5SRE7 291 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 DNM1P34Q6PK57 102 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 SLC25A47Q6Q0C1 308 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 TMEM108Q6UXF1 575 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 THSD4Q6ZMP0 1018 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 AMIGO2Q86SJ2 522 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 CDH24Q86UP0 819 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 DEPDC4Q8N2C3 294 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 LNX2Q8N448 690 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 WDR31Q8NA23 367 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 IL17RDQ8NFM7 739 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 OR52N5Q8NH56 324 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 TEX47Q8TBZ9 253 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 NIPSNAP1Q9BPW8 284 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 TSSK6Q9BXA6 273 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 PAPOLBQ9NRJ5 636 aaKnown RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 RASSF1Q9NS23 344 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 TBC1D23Q9NUY8 699 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 IL20RAQ9UHF4 553 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 KLHL21Q9UJP4 597 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 SETD2Q9BYW2 2564 aaPredicted RBP10.9□□□□□ -0.66
COL4A5-206ENST00000489230 HIVEP1P15822 2718 aa10.9□□□□□ -0.66
COL4A5-206ENST00000489230 FREM1Q5H8C1 2179 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 A0A096LPE4 126 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 TEX13CA0A0J9YWL9 993 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 A0A1W2PPZ6 126 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 SOCS2O14508 198 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
COL4A5-206ENST00000489230 UBL3O95164 117 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 CBR1P16152 277 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 GIPRP48546 466 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 ESRRGP62508 458 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 MRPS34P82930 218 aaKnown RBP10.89□□□□□ -0.67
COL4A5-206ENST00000489230 SLC36A2Q495M3 483 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 HIKESHIQ53FT3 197 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 SLC27A4Q6P1M0 643 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 SPNS3Q6ZMD2 512 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 PARP8Q8N3A8 854 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 SLC22A24Q8N4F4 322 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 NMD3Q96D46 503 aaKnown RBP10.89□□□□□ -0.67
COL4A5-206ENST00000489230 ZNF837Q96EG3 531 aaPredicted RBP10.89□□□□□ -0.67
COL4A5-206ENST00000489230 EGLN3Q9H6Z9 239 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 TMEM38BQ9NVV0 291 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 REV1Q9UBZ9 1251 aa10.89□□□□□ -0.67
COL4A5-206ENST00000489230 H3BNX3 289 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 BHLHE40O14503 412 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 PTHP01270 115 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 CD3EP07766 207 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 POU1F1P28069 291 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 CDKN2AP42771 156 aaKnown RBP10.88□□□□□ -0.67
COL4A5-206ENST00000489230 CAPZA2P47755 286 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 CENPAP49450 140 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 PCBD1P61457 104 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 TESK1Q15569 626 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 SLC36A3Q495N2 470 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 MESTQ5EB52 335 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 FAM27BQ5VT28 67 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 GLB1L2Q8IW92 636 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 WDFY1Q8IWB7 410 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 OR4K13Q8NH42 304 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 NSMAFQ92636 917 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 PIK3IP1Q96FE7 263 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 RBM4BQ9BQ04 359 aaKnown RBP10.88□□□□□ -0.67
COL4A5-206ENST00000489230 RBM4Q9BWF3 364 aaKnown RBP10.88□□□□□ -0.67
COL4A5-206ENST00000489230 PRRG3Q9BZD7 231 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 GABARAPL1Q9H0R8 117 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 SEMA6AQ9H2E6 1030 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 SEC61A2Q9H9S3 476 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 KRT84Q9NSB2 600 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 ORC6Q9Y5N6 252 aa10.88□□□□□ -0.67
COL4A5-206ENST00000489230 ALPK2Q86TB3 2170 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms