RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 GSDMCQ9BYG8 508 aa6.96□□□□□ -1.3
BEST3-205ENST00000488961 ULBP3Q9BZM4 244 aa6.96□□□□□ -1.3
BEST3-205ENST00000488961 MTHFD2LQ9H903 347 aaPredicted RBP6.96□□□□□ -1.3
BEST3-205ENST00000488961 ZFP57Q9NU63 452 aa6.96□□□□□ -1.3
BEST3-205ENST00000488961 PHF11Q9UIL8 331 aa6.96□□□□□ -1.3
BEST3-205ENST00000488961 ADAM29Q9UKF5 820 aa6.96□□□□□ -1.3
BEST3-205ENST00000488961 AK6Q9Y3D8 172 aaKnown RBP6.96□□□□□ -1.3
BEST3-205ENST00000488961 BTBD17A6NE02 478 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ARRDC5A6NEK1 342 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SHISA7A6NL88 538 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SHISA8B8ZZ34 492 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MCRIP1C9JLW8 97 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CDC40O60508 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
BEST3-205ENST00000488961 GPR75O95800 540 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 BPNT1O95861 308 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TNFP01375 233 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 PIPP12273 146 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 SNRPBP14678 240 aaKnown RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 GABRA1P14867 456 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ELK1P19419 428 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 NFYAP23511 347 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 AKT2P31751 481 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SOX2P48431 317 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ZP2Q05996 745 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TOMM34Q15785 309 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 C3orf38Q5JPI3 329 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ABHD13Q7L211 337 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 OR2L13Q8N349 312 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 DNAAF1Q8NEP3 725 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ZC3H10Q96K80 434 aaKnown RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 ADOQ96SZ5 270 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 THAP7Q9BT49 309 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 DPAGT1Q9H3H5 408 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 BCL2L10Q9HD36 194 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 NANSQ9NR45 359 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ENAMQ9NRM1 1142 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 EXTL2Q9UBQ6 330 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 GNG8Q9UK08 70 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 PRR19A6NJB7 356 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ACOD1A6NK06 481 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MASP2O00187 686 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 GALR3O60755 368 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 HCKP08631 526 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 C4BPBP20851 252 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 EFNA3P52797 238 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 OR1D5P58170 312 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SMIM11AP58511 58 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 UBE2IP63279 158 aaKnown RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 MGAT2Q10469 447 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MLLT11Q13015 90 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 PLA2G7Q13093 441 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CD226Q15762 336 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CCDC157Q569K6 752 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 STPG1Q5TH74 334 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MEDAGQ5VYS4 303 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ZNF660Q6AZW8 331 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 APOOLQ6UXV4 268 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 GDPGP1Q6ZNW5 385 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MBOAT2Q6ZWT7 520 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TMUB2Q71RG4 321 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SLC29A4Q7RTT9 530 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CEACAM19Q7Z692 300 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TRIM69Q86WT6 500 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SPAG16Q8N0X2 631 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ZNF619Q8N2I2 560 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CCDC54Q8NEL0 328 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TMEM185AQ8NFB2 350 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 OR5M9Q8NGP3 310 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 OR2I1PQ8NGU4 316 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 C16orf52Q8NHV5 167 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 BAHD1Q8TBE0 780 aaPredicted RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 PPP1R14AQ96A00 147 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SLC25A36Q96CQ1 311 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SERINC2Q96SA4 455 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 MICU1Q9BPX6 476 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 TCEAL7Q9BRU2 100 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 RAB11FIP5Q9BXF6 653 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ZNF576Q9H609 170 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 CA10Q9NS85 328 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 ASB6Q9NWX5 421 aa6.95□□□□□ -1.3
BEST3-205ENST00000488961 SF3B6Q9Y3B4 125 aaKnown RBP6.95□□□□□ -1.3
BEST3-205ENST00000488961 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 PRR23D1E9PI22 279 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 H0YIG0 161 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 ZNF593O00488 134 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 FZD7O75084 574 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 EIF4EP06730 217 aaKnown RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 HOXC4P09017 264 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 CD3GP09693 182 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 PRR23D2P0DMB1 279 aaPredicted RBP6.94□□□□□ -1.3
BEST3-205ENST00000488961 ZNF44P15621 663 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 CPEP16870 476 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 ITGA3P26006 1051 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 S100A11P31949 105 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 TNFRSF4P43489 277 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 OCLNQ16625 522 aa6.94□□□□□ -1.3
BEST3-205ENST00000488961 ARHGAP11BQ3KRB8 267 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms