RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 MELKQ14680 651 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 PLEKHN1Q494U1 663 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 DNM1P34Q6PK57 102 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 NCCRP1Q6ZVX7 275 aaPredicted RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 USP43Q70EL4 1123 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 YRDCQ86U90 279 aaKnown RBP11.36□□□□□ -0.59
NELFE-209ENST00000488426 UEVLDQ8IX04 471 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 SYS1Q8N2H4 156 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 KDM8Q8N371 416 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 NDNFQ8TB73 568 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 ZHX1-C8orf76Q96EF9 292 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 KLHL15Q96M94 604 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 CHCHD6Q9BRQ6 235 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 NUAK2Q9H093 628 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 MARCH7Q9H992 704 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 TRIM36Q9NQ86 728 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 BABAM2Q9NXR7 383 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 RASD1Q9Y272 281 aa11.36□□□□□ -0.59
NELFE-209ENST00000488426 LOC100506127A0A0U1RQW1 187 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 TTLL8A6PVC2 850 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 NME2P1O60361 137 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SELENOFO60613 162 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 LALBAP00709 142 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SP1P08047 785 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 NME2P22392 152 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 GABRA5P31644 462 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 UQCRFS1P47985 274 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 H3F3AP84243 136 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SLC25A25Q6KCM7 469 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 NHLRC1Q6VVB1 395 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 ZNF554Q86TJ5 538 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 KLBQ86Z14 1044 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SULF2Q8IWU5 870 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 TIGD4Q8IY51 512 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 DYNC2LI1Q8TCX1 351 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 HAS2Q92819 552 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SFXN2Q96NB2 322 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 KCNK17Q96T54 332 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 NAA11Q9BSU3 229 aaPredicted RBP11.35□□□□□ -0.59
NELFE-209ENST00000488426 ZNF703Q9H7S9 590 aaPredicted RBP11.35□□□□□ -0.59
NELFE-209ENST00000488426 ISG20L2Q9H9L3 353 aaKnown RBP11.35□□□□□ -0.59
NELFE-209ENST00000488426 PLA2G3Q9NZ20 509 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 SSR3Q9UNL2 185 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 B9D1Q9UPM9 204 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 KIAA1549Q9HCM3 1950 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 ESPL1Q14674 2120 aa11.35□□□□□ -0.59
NELFE-209ENST00000488426 IGLV1-36A0A0B4J1U3 117 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 PFDN1O60925 122 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 VAMP5O95183 116 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CD46P15529 392 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CRYBB2P43320 205 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 PSMD7P51665 324 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CDONQ4KMG0 1287 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CCDC92Q53HC0 331 aaPredicted RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 TMEM225Q6GV28 225 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 ZNF511Q8NB15 262 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 C4orf36Q96KX1 117 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 COQ7Q99807 217 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CENPOQ9BU64 300 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 TSPAN10Q9H1Z9 355 aaPredicted RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 DCSTAMPQ9H295 470 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 KLHL13Q9P2N7 655 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 SF3B6Q9Y3B4 125 aaKnown RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 A0A0J9YW62 118 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 FAM171A2A8MVW0 826 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CENPBD1B2RD01 187 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 KLRC4-KLRK1H3BQV0 150 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 TRAF3IP2O43734 574 aaPredicted RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 SLC16A7O60669 478 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 GPX5O75715 221 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 TRAPPC6AO75865 159 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 HPNP05981 417 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 CD53P19397 219 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 BIDP55957 195 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 POU4F3Q15319 338 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 DGUOKQ16854 277 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 HYAL4Q2M3T9 481 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 LYPD4Q6UWN0 246 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 ESPNLQ6ZVH7 1005 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 VASH1Q7L8A9 365 aaPredicted RBP11.34□□□□□ -0.59
NELFE-209ENST00000488426 SSX6Q7RTT6 188 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 SNX33Q8WV41 574 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 INTS14Q96SY0 518 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 HES7Q9BYE0 225 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 SVILO95425 2214 aa11.34□□□□□ -0.59
NELFE-209ENST00000488426 FREM3P0C091 2139 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 USP9YO00507 2555 aaPredicted RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 SPTAN1Q13813 2472 aaKnown RBP11.33□□□□□ -0.6
NELFE-209ENST00000488426 HIVEP3Q5T1R4 2406 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 J3QLW9 94 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 PHYHO14832 338 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 CTLA4P16410 223 aa11.33□□□□□ -0.6
NELFE-209ENST00000488426 ZNF19P17023 458 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms