RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.36
NME1-208ENST00000487481 TMEM106BQ9NUM4 274 aa12.79□□□□□ -0.36
NME1-208ENST00000487481 DCAF16Q9NXF7 216 aa12.79□□□□□ -0.36
NME1-208ENST00000487481 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
NME1-208ENST00000487481 GLTPQ9NZD2 209 aa12.79□□□□□ -0.36
NME1-208ENST00000487481 ZDHHC8Q9ULC8 765 aa12.79□□□□□ -0.36
NME1-208ENST00000487481 LRCH1Q9Y2L9 728 aa12.79□□□□□ -0.36
NME1-208ENST00000487481 ERLIN1O75477 346 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 CLPXO76031 633 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 TGDSO95455 350 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 APLNRP35414 380 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 BTG1P62324 171 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 LRRC74AQ0VAA2 488 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 C2orf68Q2NKX9 166 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 ZMAT1Q5H9K5 638 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 ALG10BQ5I7T1 473 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 RPS26P11Q5JNZ5 115 aaPredicted RBP12.78□□□□□ -0.36
NME1-208ENST00000487481 TMEM255AQ5JRV8 349 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 WDR88Q6ZMY6 472 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 REC114Q7Z4M0 266 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 LRRC28Q86X40 367 aaPredicted RBP12.78□□□□□ -0.36
NME1-208ENST00000487481 LSMEM1Q8N8F7 131 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 RBM15BQ8NDT2 890 aaKnown RBP12.78□□□□□ -0.36
NME1-208ENST00000487481 BHLHE22Q8NFJ8 381 aaPredicted RBP12.78□□□□□ -0.36
NME1-208ENST00000487481 SLC38A5Q8WUX1 472 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 DNAJA4Q8WW22 397 aaPredicted RBP12.78□□□□□ -0.36
NME1-208ENST00000487481 EPYCQ99645 322 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 MARCH7Q9H992 704 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 TCF7L1Q9HCS4 588 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 NOX4Q9NPH5 578 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 TNFRSF19Q9NS68 423 aa12.78□□□□□ -0.36
NME1-208ENST00000487481 A0A0G2JPF8 293 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 A0A1B0GWA3 101 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 SMIM23A6NLE4 172 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 HNRNPCL2B2RXH8 293 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 HNRNPCL3B7ZW38 293 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 HNRNPCL1O60812 293 aaKnown RBP12.77□□□□□ -0.37
NME1-208ENST00000487481 SERPINI2O75830 405 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 BGLAPP02818 100 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 SHBGP04278 402 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 MYZAPP0CAP1 466 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 HNRNPCL4P0DMR1 293 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 MPV17P39210 176 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 BIDP55957 195 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 PAX2Q02962 417 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 NRN1LQ496H8 165 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 KPRPQ5T749 579 aaPredicted RBP12.77□□□□□ -0.37
NME1-208ENST00000487481 MBNL2Q5VZF2 373 aaKnown RBP12.77□□□□□ -0.37
NME1-208ENST00000487481 UNQ6126/PRO20091Q6UXV3 157 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 ZNF283Q8N7M2 679 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 OR10S1Q8NGN2 331 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 OR6X1Q8NH79 312 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 FAM110DQ8TAY7 271 aaPredicted RBP12.77□□□□□ -0.37
NME1-208ENST00000487481 MARS2Q96GW9 593 aaKnown RBP12.77□□□□□ -0.37
NME1-208ENST00000487481 TMEM19Q96HH6 336 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 PPP1R36Q96LQ0 422 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 SLC19A3Q9BZV2 496 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 A4GALTQ9NPC4 353 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 SLC6A13Q9NSD5 602 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 ASH2LQ9UBL3 628 aa12.77□□□□□ -0.37
NME1-208ENST00000487481 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 H3BSA7 217 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 PLPP3O14495 311 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 DHHO43323 396 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 FAM153BP0C7A2 387 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 ETFAP13804 333 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 AHCYP23526 432 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 CPT2P23786 658 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 HTR2AP28223 471 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 MVDP53602 400 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 PROK1P58294 105 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 BPIFB3P59826 476 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 DSTNP60981 165 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 TNFAIP6P98066 277 aaPredicted RBP12.76□□□□□ -0.37
NME1-208ENST00000487481 ZMYND11Q15326 602 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 SPRNQ5BIV9 151 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 SPATA46Q5T0L3 261 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 FAM91A1Q658Y4 838 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 Q6YL49 198 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 ZNF101Q8IZC7 436 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 KLF14Q8TD94 323 aaPredicted RBP12.76□□□□□ -0.37
NME1-208ENST00000487481 ZNF566Q969W8 418 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 THOC1Q96FV9 657 aaKnown RBP12.76□□□□□ -0.37
NME1-208ENST00000487481 MOGAT1Q96PD6 335 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 RHOXF2Q9BQY4 288 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
NME1-208ENST00000487481 NANOGQ9H9S0 305 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 SLC17A7Q9P2U7 560 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
NME1-208ENST00000487481 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
NME1-208ENST00000487481 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
NME1-208ENST00000487481 G3V4G9 280 aa12.75□□□□□ -0.37
NME1-208ENST00000487481 PLXNB1O43157 2135 aa12.75□□□□□ -0.37
NME1-208ENST00000487481 CCNOP22674 350 aa12.75□□□□□ -0.37
NME1-208ENST00000487481 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
NME1-208ENST00000487481 CRATP43155 626 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms