RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 ELMO2Q96JJ3 720 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 AMDHD1Q96NU7 426 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 OR5M11Q96RB7 305 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 TTYH2Q9BSA4 534 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 C2orf88Q9BSF0 95 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 COPS4Q9BT78 406 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 POTEKPQ9BYX7 375 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 DERL2Q9GZP9 239 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ASB8Q9H765 288 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 AMBNQ9NP70 447 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 NT5MQ9NPB1 228 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ASCL3Q9NQ33 180 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 POLE4Q9NR33 117 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 CHRAC1Q9NRG0 131 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ABCC13Q9NSE7 274 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 PDP1Q9P0J1 537 aaPredicted RBP3.83□□□□□ -1.8
LMBR1-218ENST00000486837 TMEM9Q9P0T7 183 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 GNG12Q9UBI6 72 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 PEF1Q9UBV8 284 aaKnown RBP3.83□□□□□ -1.8
LMBR1-218ENST00000486837 CTSFQ9UBX1 484 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 APOBEC3BQ9UH17 382 aaKnown RBP3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ZNF639Q9UID6 485 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ZNF221Q9UK13 617 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ADAM28Q9UKQ2 775 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 RAB26Q9ULW5 256 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 SLC9A8Q9Y2E8 581 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 MMP24Q9Y5R2 645 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 NPTNQ9Y639 398 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 USP47Q96K76 1375 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 RPRD2Q5VT52 1461 aaKnown RBP3.83□□□□□ -1.8
LMBR1-218ENST00000486837 ARHGEF11O15085 1522 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 CUX1P39880 1505 aa3.83□□□□□ -1.8
LMBR1-218ENST00000486837 HECW1Q76N89 1606 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PTPN23Q9H3S7 1636 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 SYNJ2O15056 1496 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RAPGEF2Q9Y4G8 1499 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 ISPDA4D126 451 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 H3BMH7 237 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PSMD12O00232 456 aaPredicted RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 ZBTB5O15062 677 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 STX7O15400 261 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 SGCEO43556 437 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 DUX1O43812 170 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 HUS1O60921 280 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RPP14O95059 124 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 TSPAN12O95859 305 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 CCNE2O96020 404 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 KLK3P07288 261 aaPredicted RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 CRYGCP07315 174 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 SNRPCP09234 159 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 UBTFL1P0CB47 393 aaPredicted RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 UMPSP11172 480 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PSKH1P11801 424 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 CD1EP15812 388 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 BCL3P20749 454 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 CYP2B6P20813 491 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PRPS1L1P21108 318 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 DDOSTP39656 456 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RAG2P55895 527 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 DSCR10P59022 87 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 MAGOHP61326 146 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RPS15P62841 145 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PSPHP78330 225 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 BNIP2Q12982 314 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 GRB7Q14451 532 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 GANABQ14697 944 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PDK2Q15119 407 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PPP1R3AQ16821 1122 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 NKAIN1Q4KMZ8 207 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PAGE2BQ5JRK9 111 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 NHLRC3Q5JS37 347 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RSBN1Q5VWQ0 802 aaPredicted RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 OR5M10Q6IEU7 315 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 OR4F3Q6IEY1 312 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 ANKRD26P1Q6NSI1 321 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RNASEKQ6P5S7 137 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 GDPD3Q7L5L3 318 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 SSX9Q7RTT3 188 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 DPPA2Q7Z7J5 298 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 ACOT1Q86TX2 421 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RANBP3LQ86VV4 465 aaPredicted RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 MARCH9Q86YJ5 346 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 PLCZ1Q86YW0 608 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 TGIF2LXQ8IUE1 241 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 GPR65Q8IYL9 337 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 OR4C5Q8NGB2 326 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 OR6Q1Q8NGQ2 317 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 OR1L4Q8NGR5 311 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 S100ZQ8WXG8 99 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 GTF2H4Q92759 462 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 TCEAL3Q969E4 200 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 MAGOHBQ96A72 148 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 EXOSC8Q96B26 276 aaKnown RBP3.82□□□□□ -1.8
LMBR1-218ENST00000486837 ISOC1Q96CN7 298 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 SGTBQ96EQ0 304 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 RNF170Q96K19 258 aa3.82□□□□□ -1.8
LMBR1-218ENST00000486837 QKIQ96PU8 341 aaKnown RBP eCLIP3.82□□□□□ -1.84e-8■■■■□ 23.2
LMBR1-218ENST00000486837 TMEM109Q9BVC6 243 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms