RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ATF6BQ99941 703 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 ATPIF1Q9UII2 106 aa12.02□□□□□ -0.49
HMGN1-216ENST00000486741 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 FRG2CA6NGY1 282 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 LDOC1O95751 146 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 LINC00696Q6ZRV3 163 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 P4HA3Q7Z4N8 544 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 FGGYQ96C11 551 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 NOX3Q9HBY0 568 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 TRABD2BA6NFA1 517 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 M0R233 179 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 UBL3O95164 117 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 FARS2O95363 451 aaKnown RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 IRF3Q14653 427 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 METAP1DQ6UB28 335 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 CPEB2Q7Z5Q1 589 aaKnown RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 GIMAP1Q8WWP7 306 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 RNF170Q96K19 258 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM212A6NML5 194 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 PATE3B3GLJ2 98 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 NUPL2O15504 423 aaKnown RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 POU3F3P20264 500 aaPredicted RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 PWWP2BQ6NUJ5 590 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 RPS19BP1Q86WX3 136 aaKnown RBP12.01□□□□□ -0.49
HMGN1-216ENST00000486741 SLCO1C1Q9NYB5 712 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 PADI1Q9ULC6 663 aa12.01□□□□□ -0.49
HMGN1-216ENST00000486741 ANAPC1Q9H1A4 1944 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 IGHV3-15A0A0B4J1V0 119 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 B4DXG7 233 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 DISC1C4P0D8 188 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 BHLHE40O14503 412 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TCRBP04435 133 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 RFC3P40938 356 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 VEGFCP49767 419 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 SLC26A5P58743 744 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 FMODQ06828 376 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 SLC35D3Q5M8T2 416 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM244Q5VVB8 128 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 BAIAP2L2Q6UXY1 529 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 SSX6Q7RTT6 188 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 OR1J4Q8NGS1 313 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 PRSS27Q9BQR3 290 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ULBP2Q9BZM5 246 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ARL6Q9H0F7 186 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 APMAPQ9HDC9 416 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 MBD2Q9UBB5 411 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 DNAJC13O75165 2243 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ZIC2O95409 532 aaPredicted RBP12□□□□□ -0.49
HMGN1-216ENST00000486741 EPPINO95925 133 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 GPR3P46089 330 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 FOXF1Q12946 379 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 YIF1BQ5BJH7 314 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 YRDCQ86U90 279 aaKnown RBP12□□□□□ -0.49
HMGN1-216ENST00000486741 OR52I2Q8NH67 350 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 AUNIPQ9H7T9 357 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 WNT16Q9UBV4 365 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 FITM1A5D6W6 292 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TRIM64A6NGJ6 449 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 DVL2O14641 736 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TFP02787 698 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 KIR2DL3P43628 341 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 DEFA5Q01523 94 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ETFDHQ16134 617 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM205Q6UW68 189 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 FBLIM1Q8WUP2 373 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 HSD17B8Q92506 261 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ACTR6Q9GZN1 396 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 C1orf198Q9H425 327 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 PLEKHB1Q9UF11 243 aaPredicted RBP12□□□□□ -0.49
HMGN1-216ENST00000486741 TEX13DA0A0J9YY54 714 aaPredicted RBP12□□□□□ -0.49
HMGN1-216ENST00000486741 ANKRD34BA5PLL1 514 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 MEGF11A6BM72 1044 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM221A6NGB7 291 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 C4orf47A7E2U8 309 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 TMEM229AB2RXF0 380 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 ZFPL1O95159 310 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 MSL3P1P0C860 447 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 PNLIPRP2P54317 469 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 HSF1Q00613 529 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 SELENBP1Q13228 472 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 SLC25A24Q6NUK1 477 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 COQ8AQ8NI60 647 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 PTPMT1Q8WUK0 201 aaPredicted RBP12□□□□□ -0.49
HMGN1-216ENST00000486741 TXNDC15Q96J42 360 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 FKRPQ9H9S5 495 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 PFDN2Q9UHV9 154 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 NUBP2Q9Y5Y2 271 aa12□□□□□ -0.49
HMGN1-216ENST00000486741 APC2O95996 2303 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ARPC5O15511 151 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 FABP7O15540 132 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 SCGB1D2O95969 90 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ATF1P18846 271 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 UQCRC1P31930 480 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 SSR4P51571 173 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 S100A10P60903 97 aa11.99□□□□□ -0.49
HMGN1-216ENST00000486741 EBPQ15125 230 aaKnown RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 ZNF658BQ4V348 819 aaPredicted RBP11.99□□□□□ -0.49
HMGN1-216ENST00000486741 UBE2NLQ5JXB2 153 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms