RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 CNIH3Q8TBE1 160 aa15.03■□□□□ -0
VIM-205ENST00000485947 PIGTQ969N2 578 aa15.03■□□□□ -0
VIM-205ENST00000485947 DNAJA3Q96EY1 480 aa15.03■□□□□ -0
VIM-205ENST00000485947 ERMAPQ96PL5 475 aaPredicted RBP15.03■□□□□ -0
VIM-205ENST00000485947 NAA11Q9BSU3 229 aaPredicted RBP15.03■□□□□ -0
VIM-205ENST00000485947 KATNB1Q9BVA0 655 aa15.03■□□□□ -0
VIM-205ENST00000485947 LIME1Q9H400 295 aa15.03■□□□□ -0
VIM-205ENST00000485947 ZNF696Q9H7X3 374 aa15.03■□□□□ -0
VIM-205ENST00000485947 CLN6Q9NWW5 311 aa15.03■□□□□ -0
VIM-205ENST00000485947 EMC3Q9P0I2 261 aa15.03■□□□□ -0
VIM-205ENST00000485947 PLEKHA6Q9Y2H5 1048 aa15.03■□□□□ -0
VIM-205ENST00000485947 PCDHGB5Q9Y5G0 923 aa15.03■□□□□ -0
VIM-205ENST00000485947 IER3IP1Q9Y5U9 82 aa15.03■□□□□ -0
VIM-205ENST00000485947 AQP7P3A6NL99 342 aa15.02■□□□□ -0
VIM-205ENST00000485947 RIIAD1A6NNX1 92 aa15.02■□□□□ -0
VIM-205ENST00000485947 RNF13O43567 381 aa15.02■□□□□ -0
VIM-205ENST00000485947 PRKYO43930 277 aa15.02■□□□□ -0
VIM-205ENST00000485947 TMCC2O75069 709 aa15.02■□□□□ -0
VIM-205ENST00000485947 WBP4O75554 376 aaKnown RBP15.02■□□□□ -0
VIM-205ENST00000485947 RPSAP08865 295 aaKnown RBP15.02■□□□□ -0
VIM-205ENST00000485947 SDHAP31040 664 aa15.02■□□□□ -0
VIM-205ENST00000485947 TFAP2EQ6VUC0 442 aa15.02■□□□□ -0
VIM-205ENST00000485947 FAM122BQ7Z309 247 aa15.02■□□□□ -0
VIM-205ENST00000485947 CCDC103Q8IW40 242 aa15.02■□□□□ -0
VIM-205ENST00000485947 TUSC5Q8IXB3 177 aa15.02■□□□□ -0
VIM-205ENST00000485947 GABRG1Q8N1C3 465 aa15.02■□□□□ -0
VIM-205ENST00000485947 ANKK1Q8NFD2 765 aa15.02■□□□□ -0
VIM-205ENST00000485947 APH1BQ8WW43 257 aa15.02■□□□□ -0
VIM-205ENST00000485947 UBE2FQ969M7 185 aa15.02■□□□□ -0
VIM-205ENST00000485947 NGBQ9NPG2 151 aa15.02■□□□□ -0
VIM-205ENST00000485947 PLCXD1Q9NUJ7 323 aa15.02■□□□□ -0
VIM-205ENST00000485947 SEC14L4Q9UDX3 406 aa15.02■□□□□ -0
VIM-205ENST00000485947 RASD1Q9Y272 281 aa15.02■□□□□ -0
VIM-205ENST00000485947 IGKV3D-15A0A087WSY6 115 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 LOC102725191A0A1B0GVB3 256 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 A0A1W2PRG6 482 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 SNTNA6NMZ2 147 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 C11orf98E9PRG8 122 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 MS4A18H0YCH9 400 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 M0R129 80 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 SLC1A7O00341 560 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 GPR171O14626 319 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 TLX2O43763 284 aaPredicted RBP15.01□□□□□ -0.01
VIM-205ENST00000485947 AKR7A3O95154 331 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 VAMP5O95183 116 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 F13BP05160 661 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 LYNP07948 512 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 ZNF3P17036 446 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 AHCYP23526 432 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 OR3A2P47893 321 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 P2RY4P51582 365 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 GABARAPL2P60520 117 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 ERVK-25P63136 954 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 RASGEF1BQ0VAM2 473 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 MS4A18Q3C1V0 323 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 LAIR2Q6ISS4 152 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 C20orf204Q6ZNR8 217 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 PXKQ7Z7A4 578 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 IGFN1Q86VF2 1251 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 TGIF2LYQ8IUE0 185 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 IL4I1Q96RQ9 567 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 TXNIPQ9H3M7 391 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 SCN3BQ9NY72 215 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 GRHPRQ9UBQ7 328 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 NOX1Q9Y5S8 564 aa15.01□□□□□ -0.01
VIM-205ENST00000485947 SMAD9O15198 467 aaKnown RBP15□□□□□ -0.01
VIM-205ENST00000485947 CD53P19397 219 aa15□□□□□ -0.01
VIM-205ENST00000485947 PAICSP22234 425 aaKnown RBP15□□□□□ -0.01
VIM-205ENST00000485947 DAP3P51398 398 aaKnown RBP15□□□□□ -0.01
VIM-205ENST00000485947 SLC16A1P53985 500 aa15□□□□□ -0.01
VIM-205ENST00000485947 RPL27P61353 136 aaKnown RBP15□□□□□ -0.01
VIM-205ENST00000485947 H3F3AP84243 136 aa15□□□□□ -0.01
VIM-205ENST00000485947 ITGADQ13349 1161 aa15□□□□□ -0.01
VIM-205ENST00000485947 POU4F3Q15319 338 aa15□□□□□ -0.01
VIM-205ENST00000485947 SFRP5Q5T4F7 317 aa15□□□□□ -0.01
VIM-205ENST00000485947 C1QTNF12Q5T7M4 302 aa15□□□□□ -0.01
VIM-205ENST00000485947 NXNL2Q5VZ03 156 aa15□□□□□ -0.01
VIM-205ENST00000485947 FAM205BPQ63HN1 556 aa15□□□□□ -0.01
VIM-205ENST00000485947 Q6ZT83 130 aa15□□□□□ -0.01
VIM-205ENST00000485947 HDDC2Q7Z4H3 204 aa15□□□□□ -0.01
VIM-205ENST00000485947 JAZF1Q86VZ6 243 aa15□□□□□ -0.01
VIM-205ENST00000485947 GID4Q8IVV7 300 aa15□□□□□ -0.01
VIM-205ENST00000485947 LRRC75A-AS1Q8N1F1 130 aa15□□□□□ -0.01
VIM-205ENST00000485947 TMEM99Q8N816 258 aa15□□□□□ -0.01
VIM-205ENST00000485947 HSD17B8Q92506 261 aa15□□□□□ -0.01
VIM-205ENST00000485947 PIK3IP1Q96FE7 263 aa15□□□□□ -0.01
VIM-205ENST00000485947 LRR1Q96L50 414 aa15□□□□□ -0.01
VIM-205ENST00000485947 OXGR1Q96P68 337 aa15□□□□□ -0.01
VIM-205ENST00000485947 SNX18Q96RF0 628 aa15□□□□□ -0.01
VIM-205ENST00000485947 TMUB1Q9BVT8 246 aa15□□□□□ -0.01
VIM-205ENST00000485947 ACTR6Q9GZN1 396 aa15□□□□□ -0.01
VIM-205ENST00000485947 C12orf49Q9H741 205 aa15□□□□□ -0.01
VIM-205ENST00000485947 ING1Q9UK53 422 aaPredicted RBP15□□□□□ -0.01
VIM-205ENST00000485947 TPRKBQ9Y3C4 175 aa15□□□□□ -0.01
VIM-205ENST00000485947 ADAM18Q9Y3Q7 739 aa15□□□□□ -0.01
VIM-205ENST00000485947 TEX13CA0A0J9YWL9 993 aa14.99□□□□□ -0.01
VIM-205ENST00000485947 A0A1W2PPR1 153 aa14.99□□□□□ -0.01
VIM-205ENST00000485947 TRIM64A6NGJ6 449 aa14.99□□□□□ -0.01
VIM-205ENST00000485947 PRR23D1E9PI22 279 aaPredicted RBP14.99□□□□□ -0.01
VIM-205ENST00000485947 SIAH2O43255 324 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms