RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 C6orf47O95873 294 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 HPNP05981 417 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 HOXD4P09016 255 aaPredicted RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 GABRA1P14867 456 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 UQCRC2P22695 453 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 HAAOP46952 286 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 NCBP2P52298 156 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDX56-212ENST00000485367 GAS1P54826 345 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 CDK5Q00535 292 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 FABP5Q01469 135 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 GALEQ14376 348 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 CEBPEQ15744 281 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 SLC30A6Q6NXT4 461 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 PAQR6Q6TCH4 344 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 LRRC28Q86X40 367 aaPredicted RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 ZNF295-AS1Q8N0V1 137 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 ARIH2OSQ8N7S6 290 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 OR1J4Q8NGS1 313 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 TMEM203Q969S6 136 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 RFT1Q96AA3 541 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 OTUB1Q96FW1 271 aaPredicted RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 LRR1Q96L50 414 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 ADOQ96SZ5 270 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 UBQLN3Q9H347 655 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 GHITMQ9H3K2 345 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 TVP23BQ9NYZ1 205 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 Q9UFV3 132 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 GLS2Q9UI32 602 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 EXO1Q9UQ84 846 aaKnown RBP9.65□□□□□ -0.86
DDX56-212ENST00000485367 SLC6A5Q9Y345 797 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 FBN2P35556 2912 aa9.65□□□□□ -0.86
DDX56-212ENST00000485367 A0A1W2PRQ8 180 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 C5orf58C9J3I9 102 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 SMLR1H3BR10 107 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 TSC22D2O75157 780 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 TOXO94900 526 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 TP53P04637 393 aaPredicted RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 CT45A8P0DMV1 189 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 CT45A9P0DMV2 189 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 BTF3P20290 206 aaKnown RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 NTSP30990 170 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 ADH7P40394 386 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 MC3RP41968 323 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 RFX3P48380 749 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 BDH1Q02338 343 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 ZNF155Q12901 538 aaPredicted RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 GPR176Q14439 515 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 FCN2Q15485 313 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 EIPR1Q53HC9 387 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 ZNF385BQ569K4 471 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 CT45A2Q5DJT8 189 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 WIPI1Q5MNZ9 446 aaPredicted RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 TYW3Q6IPR3 259 aaKnown RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 NPSR1Q6W5P4 371 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 PLEKHM3Q6ZWE6 761 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 YRDCQ86U90 279 aaKnown RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 GLCCI1Q86VQ1 547 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 MED12Q93074 2177 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 MARC2Q969Z3 335 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 INTS12Q96CB8 462 aaKnown RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 VSTM2LQ96N03 204 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 C7orf50Q9BRJ6 194 aaKnown RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 ENKD1Q9H0I2 346 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 DPAGT1Q9H3H5 408 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 NPDC1Q9NQX5 325 aaPredicted RBP9.65□□□□□ -0.87
DDX56-212ENST00000485367 CYSLTR2Q9NS75 346 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 MED9Q9NWA0 146 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 KIF25Q9UIL4 384 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 POLQO75417 2590 aa9.65□□□□□ -0.87
DDX56-212ENST00000485367 ADGRG4Q8IZF6 3080 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 SOX14O95416 240 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 IL12BP29460 328 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 SSTR2P30874 369 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 PTGDSP41222 190 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 GIPRP48546 466 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 MTNR1BP49286 362 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 CRYZQ08257 329 aaKnown RBP9.64□□□□□ -0.87
DDX56-212ENST00000485367 ENTPD8Q5MY95 495 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 ZNF485Q8NCK3 441 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 OR4N2Q8NGD1 307 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 OR52N1Q8NH53 320 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 FANK1Q8TC84 345 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 NTNG2Q96CW9 530 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 AMDHD1Q96NU7 426 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 TIMP4Q99727 224 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 JAM3Q9BX67 310 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 ACTR6Q9GZN1 396 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 HDHD2Q9H0R4 259 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 RHCGQ9UBD6 479 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 CAMK2AQ9UQM7 478 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 OR10H1Q9Y4A9 318 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 MAB21L2Q9Y586 359 aa9.64□□□□□ -0.87
DDX56-212ENST00000485367 A0A1W2PRB8 838 aa9.63□□□□□ -0.87
DDX56-212ENST00000485367 AHRRA9YTQ3 701 aa9.63□□□□□ -0.87
DDX56-212ENST00000485367 KDM4EB2RXH2 506 aaPredicted RBP9.63□□□□□ -0.87
DDX56-212ENST00000485367 TSPAN2O60636 221 aa9.63□□□□□ -0.87
DDX56-212ENST00000485367 PTP4A3O75365 173 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms