RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 OR4M2Q8NGB6 313 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 OR5J2Q8NH18 312 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 FGFBP3Q8TAT2 258 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF519Q8TB69 540 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 POP5Q969H6 163 aaKnown RBP11.11□□□□□ -0.63
HDAC6-227ENST00000485102 RAB39BQ96DA2 213 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM38AQ9H6F2 299 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 NARFLQ9H6Q4 476 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 GLTPQ9NZD2 209 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 ARHGAP32A7KAX9 2087 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
HDAC6-227ENST00000485102 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 LOC100653049A0A140TA62 436 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 A0A1W2PPW3 197 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 PRORSD1PA6NEY8 169 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 PLPP2O43688 288 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 FMO6PO60774 539 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 KRT34O76011 436 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 MPZL1O95297 269 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 PTHP01270 115 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 MAGEB1P43366 347 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 CDH12P55289 794 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 KLF3P57682 345 aaPredicted RBP11.1□□□□□ -0.63
HDAC6-227ENST00000485102 CDK6Q00534 326 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 MOGQ16653 247 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 NKPD1Q17RQ9 610 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 FAM209AQ5JX71 171 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 PRR31Q5SQ13 230 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 INTS11Q5TA45 600 aaKnown RBP11.1□□□□□ -0.63
HDAC6-227ENST00000485102 ERICH5Q6P6B1 374 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 C16orf89Q6UX73 402 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 TRPM8Q7Z2W7 1104 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 ARHGAP24Q8N264 748 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 NANPQ8TBE9 248 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 SYNPRQ8TBG9 265 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 LRRC58Q96CX6 371 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 CGREF1Q99674 301 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 BCL2L14Q9BZR8 327 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM38BQ9NVV0 291 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 SLC25A37Q9NYZ2 338 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 TAAR3PQ9P1P4 343 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 ARMCX1Q9P291 453 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 FZR1Q9UM11 496 aa11.1□□□□□ -0.63
HDAC6-227ENST00000485102 PPIAL4EA0A075B759 164 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 PPIAL4CA0A0B4J2A2 164 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 PPIAL4DF5H284 164 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 GMNNO75496 209 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 SERPINB7O75635 380 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 FARS2O95363 451 aaKnown RBP11.09□□□□□ -0.63
HDAC6-227ENST00000485102 CLPTM1O96005 669 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 FSHBP01225 129 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 IGHV3-13P01766 116 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 IGHV2-5P01817 119 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 PATE4P0C8F1 98 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 PPIAL4FP0DN26 164 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 GPX2P18283 190 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 AHCYP23526 432 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 RAD52P43351 418 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 UCP2P55851 309 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 BIDP55957 195 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 RGS8P57771 180 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-227ENST00000485102 NCALDP61601 193 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 CCL8P80075 99 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■□□□ 14.4
HDAC6-227ENST00000485102 HIST3H3Q16695 136 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 RUNDC3AQ59EK9 446 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 GCNT6Q5T4J0 391 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 TMEM154Q6P9G4 183 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF613Q6PF04 617 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 THSD4Q6ZMP0 1018 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 MSRB3Q8IXL7 192 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 ZDHHC22Q8N966 263 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 NFKBIDQ8NI38 313 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 SNX33Q8WV41 574 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 RASSF5Q8WWW0 418 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 SLC25A44Q96H78 314 aaPredicted RBP11.09□□□□□ -0.63
HDAC6-227ENST00000485102 NSL1Q96IY1 281 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF607Q96SK3 696 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 ECSITQ9BQ95 431 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 ZNF696Q9H7X3 374 aa11.09□□□□□ -0.63
HDAC6-227ENST00000485102 TRBV5-3A0A0A0MS03 114 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 IGHV1-69-2A0A0G2JMI3 117 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 CENPBD1B2RD01 187 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 LRRN3E7EW58 273 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 DHHO43323 396 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 CHP2O43745 196 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 MFN2O95140 757 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 BCL10O95999 233 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 IFNA14P01570 189 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ADORA3P0DMS8 318 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 ADRA2CP18825 462 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 SLC6A2P23975 617 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 MXRA7P84157 204 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 PAGE3Q5JUK9 113 aa11.08□□□□□ -0.64
HDAC6-227ENST00000485102 TMEM53Q6P2H8 277 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms