RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 EGFL7Q9UHF1 273 aa10.87□□□□□ -0.67
UBR4-213ENST00000483922 FBXL3Q9UKT7 428 aa10.87□□□□□ -0.67
UBR4-213ENST00000483922 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
UBR4-213ENST00000483922 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
UBR4-213ENST00000483922 LOC100509620A0A075B734 347 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 TPD52L2O43399 206 aaKnown RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 MGRN1O60291 552 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 ANP32DO95626 131 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 ETS2P15036 469 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 SLC6A9P48067 706 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 SELENOVP59797 346 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 IL13RA1P78552 427 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 PAX2Q02962 417 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 NPTX1Q15818 432 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 RHOUQ7L0Q8 258 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 ICA1LQ8NDH6 482 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 OR5J2Q8NH18 312 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 SNX33Q8WV41 574 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 GEMIN6Q8WXD5 167 aaKnown RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 MCHR2Q969V1 340 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 SLC25A44Q96H78 314 aaPredicted RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 ITCHQ96J02 903 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 MAELQ96JY0 434 aaKnown RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 ZBTB18Q99592 522 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 TMEM43Q9BTV4 400 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 TMEM109Q9BVC6 243 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 IKZF5Q9H5V7 419 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 RNF121Q9H920 327 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 SDR39U1Q9NRG7 319 aaPredicted RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 THUMPD1Q9NXG2 353 aaKnown RBP10.86□□□□□ -0.67
UBR4-213ENST00000483922 GPR160Q9UJ42 338 aa10.86□□□□□ -0.67
UBR4-213ENST00000483922 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 IGHV3OR16-10A0A075B7F0 116 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 MDFIC2A0A1B0GVS7 189 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 CLDN34H7C241 214 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 NGFP01138 241 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 SBK2P0C263 348 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 LSP1P33241 339 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 CD80P33681 288 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 ATP4BP51164 291 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 POLR2JP52435 117 aaKnown RBP10.85□□□□□ -0.67
UBR4-213ENST00000483922 VSNL1P62760 191 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 IFFO1Q0D2I5 559 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 ZNF74Q16587 644 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 FAM209AQ5JX71 171 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 RBMS3Q6XE24 437 aaKnown RBP10.85□□□□□ -0.67
UBR4-213ENST00000483922 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 SNX32Q86XE0 403 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 LRRC18Q8N456 261 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 C10orf53Q8N6V4 93 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 OR4D11Q8NGI4 311 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 SLC25A40Q8TBP6 338 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 TMIGD2Q96BF3 282 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 ELMOD3Q96FG2 381 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 POM121L2Q96KW2 1035 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 DCLRE1CQ96SD1 692 aaKnown RBP10.85□□□□□ -0.67
UBR4-213ENST00000483922 ZNF347Q96SE7 839 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 GPA33Q99795 319 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 MRPL13Q9BYD1 178 aaKnown RBP10.85□□□□□ -0.67
UBR4-213ENST00000483922 NPTNQ9Y639 398 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
UBR4-213ENST00000483922 ISPDA4D126 451 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 HDAC3O15379 428 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 SNNO75324 88 aaPredicted RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 FOXH1O75593 365 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 ADH4P08319 380 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 KITP10721 976 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 CDAP32320 146 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 WDR4P57081 412 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 RELBQ01201 579 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 PAX8Q06710 450 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TBC1D28Q2M2D7 210 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TNFAIP8L3Q5GJ75 292 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 PABPC1L2AQ5JQF8 200 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 C6orf10Q5SRN2 563 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 TMEM53Q6P2H8 277 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 MSANTD1Q6ZTZ1 278 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 RBM45Q8IUH3 476 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 FUNDC1Q8IVP5 155 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 RBM15BQ8NDT2 890 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 KLF14Q8TD94 323 aaPredicted RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 AENQ8WTP8 325 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.84□□□□□ -0.67
UBR4-213ENST00000483922 ZNF566Q969W8 418 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 NABP1Q96AH0 204 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 SIGLEC11Q96RL6 698 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 SEPHS2Q99611 448 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 EPYCQ99645 322 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 OR2J1Q9GZK6 312 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 PATZ1Q9HBE1 687 aaKnown RBP10.84□□□□□ -0.67
UBR4-213ENST00000483922 TMEM27Q9HBJ8 222 aa10.84□□□□□ -0.67
UBR4-213ENST00000483922 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms