RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 TCEAL2Q9H3H9 227 aaPredicted RBP3.72□□□□□ -1.81
RFC4-212ENST00000479307 TMEM165Q9HC07 324 aa3.72□□□□□ -1.81
RFC4-212ENST00000479307 FARSBQ9NSD9 589 aaKnown RBP3.72□□□□□ -1.81
RFC4-212ENST00000479307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.72□□□□□ -1.81
RFC4-212ENST00000479307 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
RFC4-212ENST00000479307 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
RFC4-212ENST00000479307 SPACA6W5XKT8 324 aa3.72□□□□□ -1.81
RFC4-212ENST00000479307 ZANQ9Y493 2812 aa3.72□□□□□ -1.81
RFC4-212ENST00000479307 NBEAL2Q6ZNJ1 2754 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PPIAL4CA0A0B4J2A2 164 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 IGHV3-35A0A0C4DH35 117 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 IGHV5-10-1A0A0J9YXX1 117 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 GOLGA6L4A6NEF3 574 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 ERI2A8K979 691 aaKnown RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 C19orf84I3L1E1 186 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 ANGPT2O15123 496 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 KLHL41O60662 606 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PEX11AO75192 247 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 GUCA1CO95843 209 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PAHP00439 452 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 OPN1LWP04000 364 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 RHOXF2BP0C7M4 288 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PPIAL4GP0DN37 164 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 IGHV1-2P23083 117 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 CD70P32970 193 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 RPL4P36578 427 aaKnown RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 ACOT2P49753 483 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 CCNHP51946 323 aaPredicted RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 CXCL6P80162 114 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 C1orf61Q13536 156 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 SERTAD2Q14140 314 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 KRT71Q3SY84 523 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 TEX44Q53QW1 395 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PIP5KL1Q5T9C9 394 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 ASPHD2Q6ICH7 369 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 CGB2Q6NT52 195 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 ZNF557Q8N988 423 aaPredicted RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 ZNF606Q8WXB4 792 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 LZICQ8WZA0 190 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 KLK6Q92876 244 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 PPP1R14BQ96C90 147 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 RBM14Q96PK6 669 aaKnown RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 TSGA13Q96PP4 275 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 RHOXF2Q9BQY4 288 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 TMEM121Q9BTD3 319 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 DPH7Q9BTV6 452 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 TIPINQ9BVW5 301 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 TPPP3Q9BW30 176 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 TM2D1Q9BX74 207 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 NSRP1Q9H0G5 558 aaKnown RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 RIBC2Q9H4K1 309 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 FBXO44Q9H4M3 255 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 RDH14Q9HBH5 336 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 DMAP1Q9NPF5 467 aaPredicted RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 SLC7A10Q9NS82 523 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 SLC39A1Q9NY26 324 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 LAMP5Q9UJQ1 280 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 STOML2Q9UJZ1 356 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 SCML2Q9UQR0 700 aa3.71□□□□□ -1.82
RFC4-212ENST00000479307 HRNRQ86YZ3 2850 aaPredicted RBP3.71□□□□□ -1.82
RFC4-212ENST00000479307 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 MYO7BQ6PIF6 2116 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 GSAPA4D1B5 854 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 ZSCAN5BA6NJL1 495 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 H0YCG3 227 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 NUDT21O43809 227 aaKnown RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 ZNF189O75820 626 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 DEXIO95424 95 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 CD55P08174 381 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 HBQ1P09105 142 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 SLC35E2P0CK97 266 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 THRAP10827 490 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 CLUP10909 449 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 XRCC1P18887 633 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 ATP5A1P25705 553 aaKnown RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 DLSTP36957 453 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 CSKP41240 450 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 GNPDA1P46926 289 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 PFN3P60673 137 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 TFAMQ00059 246 aaKnown RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 DR1Q01658 176 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 ATXN7L3Q14CW9 347 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 ELOCQ15369 112 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 TPD52L1Q16890 204 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 GLYR1Q49A26 553 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 SMUG1Q53HV7 270 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 PAN3Q58A45 887 aaKnown RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 C10orf120Q5SQS8 335 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 SLC22A10Q63ZE4 541 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 ZNF57Q68EA5 555 aaPredicted RBP3.7□□□□□ -1.82
RFC4-212ENST00000479307 OR8G2PQ6IF36 304 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 TMEM17Q86X19 198 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 C9orf40Q8IXQ3 194 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 MCOLN2Q8IZK6 566 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 LINC00612Q8N6U2 182 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 CSNK1A1LQ8N752 337 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 MRAPQ8TCY5 172 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 ADAMTS16Q8TE57 1224 aa3.7□□□□□ -1.82
RFC4-212ENST00000479307 SMARCD1Q96GM5 515 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms