RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ZNF3P17036 446 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 PAICSP22234 425 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 ENPP1P22413 925 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SLC2A5P22732 501 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 AHCYP23526 432 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CRHBPP24387 322 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 DAP3P51398 398 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 NUDT6P53370 316 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CARD18P57730 90 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 GABARAPL2P60520 117 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CXCR4P61073 352 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 RPL27P61353 136 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 SRYQ05066 204 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZNF91Q05481 1191 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.91□□□□□ -1.46
USP48-208ENST00000479177 ITGADQ13349 1161 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 MELKQ14680 651 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 C3AR1Q16581 482 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 RBM48Q5RL73 367 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 ARMC4Q5T2S8 1044 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 MEDAGQ5VYS4 303 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NXNL2Q5VZ03 156 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 FAM205BPQ63HN1 556 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 STEAP3Q658P3 488 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZNF324BQ6AW86 544 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 NIPAL3Q6P499 406 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 LEG1Q6P5S2 330 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 FAM180AQ6UWF9 173 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SLC35D2Q76EJ3 337 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CXXC5Q7LFL8 322 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 BCDIN3DQ7Z5W3 292 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 JAZF1Q86VZ6 243 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZGRF1Q86YA3 2104 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 MED12LQ86YW9 2145 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CPOQ8IVL8 374 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 WDFY1Q8IWB7 410 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 UEVLDQ8IX04 471 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 KDM8Q8N371 416 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ARIH2OSQ8N7S6 290 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 EXD3Q8N9H8 876 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CYB561A3Q8NBI2 242 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SLC37A3Q8NCC5 494 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NPEPL1Q8NDH3 523 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 BBS1Q8NFJ9 593 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 OR52E2Q8NGJ4 325 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 OR4K13Q8NH42 304 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZPLD1Q8TCW7 415 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ASB10Q8WXI3 467 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 KISS1RQ969F8 398 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 WDYHV1Q96HA8 205 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZNF845Q96IR2 970 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 ZNF582Q96NG8 517 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 OXGR1Q96P68 337 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 SNX18Q96RF0 628 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 DDOQ99489 341 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 TIMP4Q99727 224 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 RHNO1Q9BSD3 238 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NAA11Q9BSU3 229 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 HCAR1Q9BXC0 346 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NMNAT2Q9BZQ4 307 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 MED20Q9H944 212 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 TIGARQ9NQ88 270 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 PLCXD1Q9NUJ7 323 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 FKBP14Q9NWM8 211 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 PAK1IP1Q9NWT1 392 aaPredicted RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 CLN6Q9NWW5 311 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 ZNF346Q9UL40 294 aaKnown RBP5.91□□□□□ -1.46
USP48-208ENST00000479177 BLOC1S6Q9UL45 172 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 NPIPA1Q9UND3 350 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 MYRFQ9Y2G1 1151 aa5.91□□□□□ -1.46
USP48-208ENST00000479177 CHD6Q8TD26 2715 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 DOCK7Q96N67 2140 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 SHANK1Q9Y566 2161 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 BSNQ9UPA5 3926 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 MAGEA13PA6NCF6 341 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 OR6C68A6NDL8 312 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 A6NIZ1 184 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 FAM183AA6NL82 134 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 ZNF716A6NP11 495 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 PRR23D1E9PI22 279 aaPredicted RBP5.9□□□□□ -1.46
USP48-208ENST00000479177 H7C1C5 153 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 XKRYO14609 159 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 CYTIPO60759 359 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 FAM20BO75063 409 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 VAMP5O95183 116 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 BCL10O95999 233 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 HTR1AP08908 422 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 PRR23D2P0DMB1 279 aaPredicted RBP5.9□□□□□ -1.46
USP48-208ENST00000479177 DBTP11182 482 aaKnown RBP5.9□□□□□ -1.46
USP48-208ENST00000479177 ACVR2AP27037 513 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 HTR1FP30939 366 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 ACVR1BP36896 505 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 CDKN2AP42771 156 aaKnown RBP5.9□□□□□ -1.46
USP48-208ENST00000479177 SLC15A1P46059 708 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 SLC25A1P53007 311 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 SLC16A1P53985 500 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 CDH11P55287 796 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 CDH15P55291 814 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 BIDP55957 195 aa5.9□□□□□ -1.46
USP48-208ENST00000479177 RAP1BP61224 184 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms