RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ATP4BP51164 291 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PCBP3P57721 371 aaKnown RBP11.32□□□□□ -0.6
VCL-205ENST00000478896 MTPNP58546 118 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 HSF2Q03933 536 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 GLO1Q04760 184 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 NPTX1Q15818 432 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 MMEL1Q495T6 779 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 LRFN4Q6PJG9 635 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 LINC00114Q6XXX2 140 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PTOV1Q86YD1 416 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 LRRC17Q8N6Y2 441 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 NOXO1Q8NFA2 376 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 GPR32P1Q8NGA4 272 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 ZNF519Q8TB69 540 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 DYDC1Q8WWB3 177 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 PLA2G12AQ9BZM1 189 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 KCNN2Q9H2S1 579 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 RABEP2Q9H5N1 569 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 SAP30LQ9HAJ7 183 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 SLC52A3Q9NQ40 469 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 DYSFO75923 2080 aa11.32□□□□□ -0.6
VCL-205ENST00000478896 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 LOC105371242A0A075B767 164 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 IGHV1-69-2A0A0G2JMI3 117 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 A0A0G2JMP0 313 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 A0A0X1KG70 313 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 A0A1W2PRG6 482 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 CLDN25C9JDP6 229 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 ANGPT2O15123 496 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 SNAP29O95721 258 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 ZNF250P15622 560 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 UCP2P55851 309 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 LMO4P61968 165 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 MOGQ16653 247 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 TSTQ16762 297 aaKnown RBP11.31□□□□□ -0.6
VCL-205ENST00000478896 ACSM5Q6NUN0 579 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 DLEU7Q6UYE1 221 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 USP51Q70EK9 711 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 PATL1Q86TB9 770 aaKnown RBP11.31□□□□□ -0.6
VCL-205ENST00000478896 RBM45Q8IUH3 476 aaKnown RBP11.31□□□□□ -0.6
VCL-205ENST00000478896 SLC30A8Q8IWU4 369 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 OR4M2Q8NGB6 313 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 OR1J1Q8NGS3 322 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
VCL-205ENST00000478896 MCHR2Q969V1 340 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 TIMD4Q96H15 378 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 MPP4Q96JB8 637 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 CCNB1IP1Q9NPC3 277 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 TRIM33Q9UPN9 1127 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 NDUFAF1Q9Y375 327 aa11.31□□□□□ -0.6
VCL-205ENST00000478896 ZNF500O60304 480 aaPredicted RBP11.3□□□□□ -0.6
VCL-205ENST00000478896 THY1P04216 161 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 F13BP05160 661 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 ASAH2BP0C7U1 165 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 CRYBB2P43320 205 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 HILS1P60008 231 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 NFYCQ13952 458 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 SELPLGQ14242 412 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 HFEQ30201 348 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 INTS11Q5TA45 600 aaKnown RBP11.3□□□□□ -0.6
VCL-205ENST00000478896 ZNF771Q7L3S4 317 aaPredicted RBP11.3□□□□□ -0.6
VCL-205ENST00000478896 C3orf56Q8N813 242 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 OR4D11Q8NGI4 311 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 RASSF5Q8WWW0 418 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 ZMYND19Q96E35 227 aaPredicted RBP11.3□□□□□ -0.6
VCL-205ENST00000478896 CGREF1Q99674 301 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 RBM4Q9BWF3 364 aaKnown RBP11.3□□□□□ -0.6
VCL-205ENST00000478896 G6PC2Q9NQR9 355 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
VCL-205ENST00000478896 ISPDA4D126 451 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 SPRY1O43609 319 aaPredicted RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 TRMUO75648 421 aaKnown RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 GCH1P30793 250 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 DAP3P51398 398 aaKnown RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 ZNF81P51508 661 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 TAS2R41P59536 307 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 AGBL2Q5U5Z8 902 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 DCAF12L2Q5VW00 463 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 UNQ6126/PRO20091Q6UXV3 157 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 USP43Q70EL4 1123 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 PEG10Q86TG7 708 aaKnown RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 BPIFB2Q8N4F0 458 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 OR10A6Q8NH74 314 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 PFN4Q8NHR9 129 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 GTF3AQ92664 365 aaKnown RBP11.29□□□□□ -0.6
VCL-205ENST00000478896 RAB1CQ92928 201 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
VCL-205ENST00000478896 ELMOD3Q96FG2 381 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms