RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SIAH3Q8IW03 269 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 SLC7A5P2Q9GIP4 190 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 TSPAN10Q9H1Z9 355 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 GHITMQ9H3K2 345 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 PILRBQ9UKJ0 227 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 A0A1W2PNV4 684 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 A0A1W2PQM1 296 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 KHNYNO15037 678 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 TCRBP04435 133 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 AP3S2P59780 193 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 MAB21L1Q13394 359 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 PLA2G2CQ5R387 149 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 KCTD18Q6PI47 426 aaPredicted RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 BTN2A1Q7KYR7 527 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 DND1Q8IYX4 353 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 ZFAND1Q8TCF1 268 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 NAT6Q93015 286 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 FYTTD1Q96QD9 318 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 LIN7BQ9HAP6 207 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 SLCO1C1Q9NYB5 712 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 OR5V1Q9UGF6 321 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 FOXJ3Q9UPW0 622 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 A0A0B4J203 849 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 SCRG1O75711 98 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 OR6A2O95222 327 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 MYF5P13349 255 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 KIR3DL2P43630 455 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 CD276Q5ZPR3 534 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 GUSBP11Q6P575 273 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 DNM1P34Q6PK57 102 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 LYPD8Q6UX82 237 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 SLC38A9Q8NBW4 561 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 ASB10Q8WXI3 467 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 S100A16Q96FQ6 103 aaKnown RBP10.99□□□□□ -0.65
PTPRF-212ENST00000477970 OR6C1Q96RD1 312 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 SLC17A5Q9NRA2 495 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 PTTG3PQ9NZH4 202 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 IKZF2Q9UKS7 526 aa10.99□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF593O00488 134 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 AQP8O94778 261 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 WISP1O95388 367 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 ADRA2CP18825 462 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 FSTP19883 344 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 CCL7P80098 99 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 MRPS15P82914 257 aaKnown RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 FAPQ12884 760 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 OLFML2AQ68BL7 652 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 CPEB2Q7Z5Q1 589 aaKnown RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 PRSS58Q8IYP2 241 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 ASCC1Q8N9N2 400 aaKnown RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF587Q96SQ5 575 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 WDR54Q9H977 334 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 KLHL9Q9P2J3 617 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 KLHL13Q9P2N7 655 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 C19orf25Q9UFG5 118 aaPredicted RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 KCNG2Q9UJ96 466 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 C17orf51A8MQB3 221 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 MS4A18H0YCH9 400 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 PSMD9O00233 223 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 SRSF10O75494 262 aaKnown RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 RPP14O95059 124 aaKnown RBP10.98□□□□□ -0.65
PTPRF-212ENST00000477970 HRGP04196 525 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 FGF5P12034 268 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 PTH2RP49190 550 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 PUDPQ08623 228 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 MS4A18Q3C1V0 323 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 WDR38Q5JTN6 314 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 HES5Q5TA89 166 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 DEGS2Q6QHC5 323 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 SLC25A36Q96CQ1 311 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 MRGPRX4Q96LA9 322 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 GON7Q9BXV9 100 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 SLC25A18Q9H1K4 315 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 EMC7Q9NPA0 242 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 SDHAF3Q9NRP4 125 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 STEAP1Q9UHE8 339 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 ABCA7Q8IZY2 2146 aa10.98□□□□□ -0.65
PTPRF-212ENST00000477970 A0A0A6YYJ9 748 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 A8MV72 311 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 DKK1O94907 266 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CD3GP09693 182 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ART1P52961 327 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 EMP2P54851 167 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 CD83Q01151 205 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 GLO1Q04760 184 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 TMEM81Q6P7N7 255 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 PAPD4Q6PIY7 484 aaKnown RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 H1FNTQ75WM6 255 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ZNF248Q8NDW4 579 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 THEM6Q8WUY1 208 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 DMRTB1Q96MA1 342 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 SPSB2Q99619 263 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ALKBH4Q9NXW9 302 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 ATXN7L1Q9ULK2 861 aaPredicted RBP10.97□□□□□ -0.65
PTPRF-212ENST00000477970 TIAF1O95411 115 aa10.97□□□□□ -0.65
PTPRF-212ENST00000477970 S100A1P23297 94 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms