RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ELF3P78545 371 aaPredicted RBP10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 LSM11P83369 360 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 GSG1Q2KHT4 349 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 AGAP6Q5VW22 663 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 RPL13AP3Q6NVV1 102 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 C1orf94Q6P1W5 598 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC22A25Q6T423 547 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 DPY19L2P2Q6ZN68 376 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 NUP37Q8NFH4 326 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF519Q8TB69 540 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 PYDC1Q8WXC3 89 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 MCHR2Q969V1 340 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF837Q96EG3 531 aaPredicted RBP10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 SNX18Q96RF0 628 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 TNFRSF13CQ96RJ3 184 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 KCNS3Q9BQ31 491 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 BDH2Q9BUT1 245 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 SIAEQ9HAT2 523 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 NRIP3Q9NQ35 241 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 PRR14LQ5THK1 2151 aa10.77□□□□□ -0.69
CLCNKA-205ENST00000477360 PLCE1Q9P212 2302 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 VSTM5A8MXK1 200 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 M0R1B8 84 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TNFRSF11BO00300 401 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ARPC3O15145 178 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 IDH3BO43837 385 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 SERPINI2O75830 405 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TXNDC12O95881 172 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 PTHP01270 115 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 FOSL1P15407 271 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 APOBEC3AP31941 199 aaPredicted RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 GSSP48637 474 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 NAAAQ02083 359 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 SEC23BQ15437 767 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC36A2Q495M3 483 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ALKBH2Q6NS38 261 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TBPL2Q6SJ96 375 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 FAM122BQ7Z309 247 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 SYT9Q86SS6 491 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 KBTBD8Q8NFY9 601 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 OR51A7Q8NH64 312 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 STMN2Q93045 179 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TRMT61AQ96FX7 289 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 FAM46AQ96IP4 442 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF75AQ96N20 296 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 TRAF4Q9BUZ4 470 aaPredicted RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF442Q9H7R0 627 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 NTN4Q9HB63 628 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 VNN3Q9NY84 501 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 GRHPRQ9UBQ7 328 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF346Q9UL40 294 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 SAMHD1Q9Y3Z3 626 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 ITPR3Q14573 2671 aa10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
CLCNKA-205ENST00000477360 AKAP9Q99996 3911 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 A0A096LPE4 126 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 A0A1W2PPZ6 126 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 UNC119BA6NIH7 251 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 GNGT2O14610 69 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 CECR9P0C854 216 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 B4GALT1P15291 398 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 SDHAP31040 664 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 TTKP33981 857 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 GUCA1AP43080 201 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 GPR4P46093 362 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 RUNX1T1Q06455 604 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 MELKQ14680 651 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 MICAQ29983 383 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 PGGHGQ32M88 737 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 FAM27BQ5VT28 67 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF770Q6IQ21 691 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC25A47Q6Q0C1 308 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 SMARCD3Q6STE5 483 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 ZER1Q7Z7L7 766 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 LSRQ86X29 649 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 TGIF2LYQ8IUE0 185 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 WDFY1Q8IWB7 410 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 C1orf174Q8IYL3 243 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 FBXL14Q8N1E6 418 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 CLDN22Q8N7P3 220 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 OR13C2Q8NGS9 318 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 LRTOMTQ8WZ04 291 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 HDAC2Q92769 488 aaKnown RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 CENPNQ96H22 339 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 BARX1Q9HBU1 254 aaPredicted RBP10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 CBLN4Q9NTU7 201 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF224Q9NZL3 707 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 HIVEP1P15822 2718 aa10.75□□□□□ -0.69
CLCNKA-205ENST00000477360 F8P00451 2351 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 TRAV27A0A087WT01 109 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 A0A1W2PR80 420 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 PRSS37A4D1T9 235 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 E7EQL1 145 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 XKRYO14609 159 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 OR10H3O60404 316 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms