RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KDELR2P33947 212 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CFHR2P36980 270 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PMELP40967 661 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GNPDA1P46926 289 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 NPBWR2P48146 333 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RFX3P48380 749 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 LHX1P48742 406 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PPOXP50336 477 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GPR143P51810 404 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CRYBA4P53673 196 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HSPA2P54652 639 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CLDN18P56856 261 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TAS2R39P59534 338 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SNAP25P60880 206 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HERVK_113P63132 956 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MYBPC1Q00872 1141 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CDR2Q01850 454 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CXCL9Q07325 125 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 AESQ08117 197 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 BST2Q10589 180 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 PPP1R8Q12972 351 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 KRR1Q13601 381 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 PTGES3Q15185 160 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 P2RY14Q15391 338 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TRAM1Q15629 374 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TNXAQ16473 311 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 HAGHQ16775 308 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TPD52L1Q16890 204 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 QRICH1Q2TAL8 776 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RFX4Q33E94 735 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ITPRIPL2Q3MIP1 535 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 DPCR1Q3MIW9 517 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GPR33Q49SQ1 333 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RNASE10Q5GAN6 216 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 CXorf66Q5JRM2 361 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 C9orf135Q5VTT2 229 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 OR4F3Q6IEY1 312 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PRR5LQ6MZQ0 368 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 LPCAT3Q6P1A2 487 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ULK3Q6PHR2 472 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ATRAIDQ6UW56 229 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GLDNQ6ZMI3 551 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMPRSS11FQ6ZWK6 438 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ZNF767PQ75MW2 155 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 FCRLAQ7L513 359 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PIGWQ7Z7B1 504 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MRPL52Q86TS9 123 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 LDB1Q86U70 411 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMEM25Q86YD3 366 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CRLF3Q8IUI8 442 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ERI1Q8IV48 349 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 MFSD6LQ8IWD5 586 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 AQP12AQ8IXF9 295 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 APCDD1Q8J025 514 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C4orf33Q8N1A6 199 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MARVELD2Q8N4S9 558 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 DNAJC22Q8N4W6 341 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C4orf32Q8N8J7 132 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 Q8N9G6 341 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 CHDHQ8NE62 594 aaPredicted RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 OR2AP1Q8NGE2 309 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 OR10W1Q8NGF6 305 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 OR9G4Q8NGQ1 327 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PIGXQ8TBF5 258 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TRMT10AQ8TBZ6 339 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 BLOC1S5Q8TDH9 187 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PPP4R1Q8TF05 950 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SDR42E1Q8WUS8 393 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 SFT2D1Q8WV19 159 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C11orf40Q8WZ69 217 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PIGCQ92535 297 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 FCGR1BQ92637 280 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GHSRQ92847 366 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RIT1Q92963 219 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMEM203Q969S6 136 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PTH2Q96A98 100 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CELF6Q96J87 481 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 TECTBQ96PL2 329 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ACOX2Q99424 681 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 CNN2Q99439 309 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 RBBP8Q99708 897 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ECSITQ9BQ95 431 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 EBF4Q9BQW3 602 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 FEM1AQ9BSK4 669 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMEM208Q9BTX3 173 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C20orf24Q9BUV8 137 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 GTPBP2Q9BX10 602 aaKnown RBP2.13□□□□□ -2.07
XRN1-211ENST00000477237 ERVK-6Q9BXR3 956 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 MAP1LC3CQ9BXW4 147 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ULBP1Q9BZM6 244 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TLNRD1Q9H1K6 362 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 PORCNQ9H237 461 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C1orf198Q9H425 327 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TLE6Q9H808 572 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 ANKZF1Q9H8Y5 726 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TPT1P8Q9HAU6 139 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 RHOFQ9HBH0 211 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 TMBIM4Q9HC24 238 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 WFDC1Q9HC57 220 aa2.13□□□□□ -2.07
XRN1-211ENST00000477237 C6orf50Q9HD87 102 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms