RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 APLNRP35414 380 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF84P51523 738 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 UCP2P55851 309 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 PCBP3P57721 371 aaKnown RBP9.24□□□□□ -0.93
CDRT1-205ENST00000475944 CLRN1P58418 232 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ERVS71-1P61550 626 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 HFEQ30201 348 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ENTPD8Q5MY95 495 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 AVPI1Q5T686 147 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 DCAF12L2Q5VW00 463 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 LRFN4Q6PJG9 635 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 USP51Q70EK9 711 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 HIST3H2AQ7L7L0 130 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 C1QL2Q7Z5L3 287 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 PAQR4Q8N4S7 273 aaPredicted RBP9.24□□□□□ -0.93
CDRT1-205ENST00000475944 C11orf65Q8NCR3 313 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ICA1LQ8NDH6 482 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 RBM15BQ8NDT2 890 aaKnown RBP9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ADAMTS16Q8TE57 1224 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 HIST1H2ACQ93077 130 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 TIMD4Q96H15 378 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 C7orf26Q96N11 449 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 TSPAN32Q96QS1 320 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 ARHGDIGQ99819 225 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 TMPRSS13Q9BYE2 586 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 IKZF5Q9H5V7 419 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 SAP30LQ9HAJ7 183 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 WIPI2Q9Y4P8 454 aa9.24□□□□□ -0.93
CDRT1-205ENST00000475944 TRAPPC13A5PLN9 417 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 MCIDASD6RGH6 385 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 KPNA4O00629 521 aaPredicted RBP9.23□□□□□ -0.93
CDRT1-205ENST00000475944 WIPF1O43516 503 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 DEAF1O75398 565 aaPredicted RBP9.23□□□□□ -0.93
CDRT1-205ENST00000475944 AVPP01185 164 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 IGHV2-5P01817 119 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 OPN1SWP03999 348 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 UMPSP11172 480 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 EGR1P18146 543 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 HSF2Q03933 536 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 DUSP7Q16829 419 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 CYP51A1Q16850 503 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 AGKQ53H12 422 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 FAM209AQ5JX71 171 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 UNQ6126/PRO20091Q6UXV3 157 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 HDDC2Q7Z4H3 204 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 NANOGNBQ7Z5D8 188 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 BPIFB2Q8N4F0 458 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 CPEB3Q8NE35 698 aaKnown RBP9.23□□□□□ -0.93
CDRT1-205ENST00000475944 NOXO1Q8NFA2 376 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 OR6T1Q8NGN1 323 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 OR1J1Q8NGS3 322 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 RAB1CQ92928 201 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 MCHR2Q969V1 340 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 ELMOD3Q96FG2 381 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 MPP4Q96JB8 637 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 CPPED1Q9BRF8 314 aaPredicted RBP9.23□□□□□ -0.93
CDRT1-205ENST00000475944 CCDC28BQ9BUN5 200 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 SLC19A3Q9BZV2 496 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 KCNN2Q9H2S1 579 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 SLC7A7Q9UM01 511 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 TRIM33Q9UPN9 1127 aa9.23□□□□□ -0.93
CDRT1-205ENST00000475944 DYSFO75923 2080 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 A0A1W2PRG6 482 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 CENPBD1B2RD01 187 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 BLOC1S5-TXNDC5H3BN57 136 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 M0QX08 132 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF500O60304 480 aaPredicted RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 IGHV3-13P01766 116 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ASAH2BP0C7U1 165 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 GCH1P30793 250 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 IDH3AP50213 366 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ATP4BP51164 291 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF81P51508 661 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 SLC3A1Q07837 685 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 NPTX1Q15818 432 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 HIST3H3Q16695 136 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 TSTQ16762 297 aaKnown RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 RETREG3Q86VR2 466 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 PTOV1Q86YD1 416 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 SLC30A8Q8IWU4 369 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 LRRC18Q8N456 261 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 LRRC17Q8N6Y2 441 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 GPR32P1Q8NGA4 272 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 VANGL1Q8TAA9 524 aaPredicted RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 TLCD1Q96CP7 247 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF347Q96SE7 839 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 SLC6A7Q99884 636 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 GAL3ST1Q99999 423 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 EBF4Q9BQW3 602 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 ZNF426Q9BUY5 554 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 CCNB1IP1Q9NPC3 277 aa9.22□□□□□ -0.93
CDRT1-205ENST00000475944 STX18Q9P2W9 335 aaKnown RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 EIF3KQ9UBQ5 218 aaKnown RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 LEF1Q9UJU2 399 aaPredicted RBP9.22□□□□□ -0.93
CDRT1-205ENST00000475944 PLSCR5A0PG75 271 aa9.21□□□□□ -0.94
CDRT1-205ENST00000475944 ERLIN1O75477 346 aa9.21□□□□□ -0.94
CDRT1-205ENST00000475944 LYPD3O95274 346 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms