RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MPP4Q96JB8 637 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 OR51B6Q9H340 312 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 NARFLQ9H6Q4 476 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF275Q9NSD4 429 aaPredicted RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 TREM2Q9NZC2 230 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 GMPR2Q9P2T1 348 aaKnown RBP6□□□□□ -1.45
HDAC3-207ENST00000475549 RIMS3Q9UJD0 308 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 TRIM33Q9UPN9 1127 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 SPEF1Q9Y4P9 236 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 UGT2A1Q9Y4X1 527 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 SNX13Q9Y5W8 968 aa6□□□□□ -1.45
HDAC3-207ENST00000475549 MALRD1Q5VYJ5 2156 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 YLPM1P49750 1951 aaKnown RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 LOC100509620A0A075B734 347 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 LOC100653049A0A140TA62 436 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HMGB1P1B2RPK0 211 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 FFAR1O14842 300 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 MGRN1O60291 552 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 PIP5K1CO60331 668 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 CDC14BO60729 498 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 KRT34O76011 436 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 OR7A10O76100 309 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SLC2A10O95528 541 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SNAP29O95721 258 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 IGF2P01344 180 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 IGHG1P01857 330 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HIST1H2ABP04908 130 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 ERCC1P07992 297 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 UMPSP11172 480 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 H2AFXP16104 143 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 ACHEP22303 614 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 DVL1P1P54792 670 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 UCP2P55851 309 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 CCL8P80075 99 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 MRPS11P82912 194 aaKnown RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 GALK2Q01415 458 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 FMODQ06828 376 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 CYLC2Q14093 348 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 NRN1LQ496H8 165 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SPRNQ5BIV9 151 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 C10orf128Q5T292 105 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 DEF8Q6ZN54 512 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HIST3H2AQ7L7L0 130 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SNX32Q86XE0 403 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 MEX3DQ86XN8 651 aaKnown RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SLC30A8Q8IWU4 369 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF101Q8IZC7 436 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 LRRC75AQ8NAA5 344 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 OR8J3Q8NGG0 315 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SLC26A7Q8TE54 656 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 C10orf82Q8WW14 230 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 ASB10Q8WXI3 467 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HDAC2Q92769 488 aaKnown RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HIST1H2ACQ93077 130 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 POM121L2Q96KW2 1035 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF416Q9BWM5 594 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 TMEM120AQ9BXJ8 343 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 VIPAS39Q9H9C1 493 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SIAEQ9HAT2 523 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 LPAR2Q9HBW0 351 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HINT3Q9NQE9 182 aaKnown RBP5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SAR1AQ9NR31 198 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 HIF1ANQ9NWT6 349 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 TAAR3PQ9P1P4 343 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 SLC7A8Q9UHI5 535 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 A4GNTQ9UNA3 340 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 CACNG2Q9Y698 323 aa5.99□□□□□ -1.45
HDAC3-207ENST00000475549 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.99□□□□□ -1.451e-6■■■■■ 31
HDAC3-207ENST00000475549 A0A1W2PPW3 197 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 C17orf100A8MU93 164 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 B4DSR2 109 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 PPIHO43447 177 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 DEAF1O75398 565 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 OR5F1O95221 314 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 VENTXO95231 258 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 NGFP01138 241 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SCG5P05408 212 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 LCKP06239 509 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 GAAP10253 952 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ACADSP16219 412 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ZNF26P17031 533 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 ITGA2P17301 1181 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 MAKP20794 623 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 KDELR2P33947 212 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 MPV17P39210 176 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 WNT5AP41221 380 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RBM34P42696 430 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 CRYBB2P43320 205 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 GPR6P46095 362 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 CLRN1P58418 232 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 RPS23P62266 143 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 MRPS34P82930 218 aaKnown RBP5.98□□□□□ -1.45
HDAC3-207ENST00000475549 PSG4Q00888 419 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 KLF10Q13118 480 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 SLC36A2Q495M3 483 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 CYBRD1Q53TN4 286 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 COQ5Q5HYK3 327 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 PABPC1L2AQ5JQF8 200 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 AVPI1Q5T686 147 aa5.98□□□□□ -1.45
HDAC3-207ENST00000475549 INTS11Q5TA45 600 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms