RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 RANBP3LQ86VV4 465 aaPredicted RBP17.36■□□□□ 0.37
VPS36-203ENST00000475375 GOLGA6L1Q8N7Z2 621 aa17.36■□□□□ 0.37
VPS36-203ENST00000475375 ANKRD42Q8N9B4 389 aa17.36■□□□□ 0.37
VPS36-203ENST00000475375 CPEB3Q8NE35 698 aaKnown RBP17.36■□□□□ 0.37
VPS36-203ENST00000475375 GTF2H4Q92759 462 aa17.36■□□□□ 0.37
VPS36-203ENST00000475375 SLC25A44Q96H78 314 aaPredicted RBP17.36■□□□□ 0.37
VPS36-203ENST00000475375 ZMAT3Q9HA38 289 aaKnown RBP17.36■□□□□ 0.37
VPS36-203ENST00000475375 SDR39U1Q9NRG7 319 aaPredicted RBP17.36■□□□□ 0.37
VPS36-203ENST00000475375 ARHGAP32A7KAX9 2087 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 PRORSD1PA6NEY8 169 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 UBDO15205 165 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 FOXH1O75593 365 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 IGHV3-13P01766 116 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 QDPRP09417 244 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 GCH1P30793 250 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 ATP4BP51164 291 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 CDK6Q00534 326 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 SLC3A1Q07837 685 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 FAM209AQ5JX71 171 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 SPATA46Q5T0L3 261 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 DOK3Q7L591 496 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 AENQ8WTP8 325 aaKnown RBP17.35■□□□□ 0.37
VPS36-203ENST00000475375 ZBTB9Q96C00 473 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 LRRC58Q96CX6 371 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 ZNF607Q96SK3 696 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 GPA33Q99795 319 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 ZNF69Q9UC07 566 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 NUP50Q9UKX7 468 aa17.35■□□□□ 0.37
VPS36-203ENST00000475375 MFN2O95140 757 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 CH25HO95992 272 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 IGHV1-46P01743 117 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 ZFP36P26651 326 aaKnown RBP17.34■□□□□ 0.37
VPS36-203ENST00000475375 AQP1P29972 269 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 ZNF84P51523 738 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 CLRN1P58418 232 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 SWT1Q5T5J6 900 aaKnown RBP17.34■□□□□ 0.37
VPS36-203ENST00000475375 LRRC18Q8N456 261 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 LRRC17Q8N6Y2 441 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 POP5Q969H6 163 aaKnown RBP17.34■□□□□ 0.37
VPS36-203ENST00000475375 EGLN1Q9GZT9 426 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 THAP1Q9NVV9 213 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 LEF1Q9UJU2 399 aaPredicted RBP17.34■□□□□ 0.37
VPS36-203ENST00000475375 AUP1Q9Y679 476 aa17.34■□□□□ 0.37
VPS36-203ENST00000475375 TPST2O60704 377 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 PGA4P0DJD7 388 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 PGA3P0DJD8 388 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 IL13RA1P78552 427 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 SCARB2Q14108 478 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 ZNF718Q3SXZ3 478 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 ARMC8Q8IUR7 673 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 BCL6BQ8N143 479 aaPredicted RBP17.33■□□□□ 0.36
VPS36-203ENST00000475375 BHLHE22Q8NFJ8 381 aaPredicted RBP17.33■□□□□ 0.36
VPS36-203ENST00000475375 SLC25A28Q96A46 364 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.36
VPS36-203ENST00000475375 WFDC6Q9BQY6 131 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 KCNN2Q9H2S1 579 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 NANSQ9NR45 359 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 TAS2R5Q9NYW4 299 aa17.33■□□□□ 0.36
VPS36-203ENST00000475375 EIF3KQ9UBQ5 218 aaKnown RBP17.33■□□□□ 0.36
VPS36-203ENST00000475375 PURGQ9UJV8 347 aaKnown RBP17.33■□□□□ 0.36
VPS36-203ENST00000475375 SERPINB7O75635 380 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 UBOX5O94941 541 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 IGHG1P01857 330 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 HIST1H2ABP04908 130 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 SBK2P0C263 348 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 UMPSP11172 480 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 SLC6A2P23975 617 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 MPV17P39210 176 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 THEM4Q5T1C6 240 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 HIST3H2AQ7L7L0 130 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 DEFB108BQ8NET1 73 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 IPCEF1Q8WWN9 437 aaPredicted RBP17.32■□□□□ 0.36
VPS36-203ENST00000475375 HIST1H2ACQ93077 130 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 MAELQ96JY0 434 aaKnown RBP17.32■□□□□ 0.36
VPS36-203ENST00000475375 OR52B2Q96RD2 323 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 MCHR1Q99705 422 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 CCNB1IP1Q9NPC3 277 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 MMP26Q9NRE1 261 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 PLEK2Q9NYT0 353 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 SLC25A37Q9NYZ2 338 aa17.32■□□□□ 0.36
VPS36-203ENST00000475375 PPIAL4EA0A075B759 164 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 PPIAL4CA0A0B4J2A2 164 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 POM121CA8CG34 1229 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 PPIAL4DF5H284 164 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 M0R3H8 397 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 KPNA4O00629 521 aaPredicted RBP17.31■□□□□ 0.36
VPS36-203ENST00000475375 PPIAL4FP0DN26 164 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 STOMP27105 288 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 MMP15P51511 669 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 ZNF74Q16587 644 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 PABPC1L2AQ5JQF8 200 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 C10orf111Q8N326 155 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 SMYD1Q8NB12 490 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 HIPK4Q8NE63 616 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 GEMIN6Q8WXD5 167 aaKnown RBP17.31■□□□□ 0.36
VPS36-203ENST00000475375 MCHR2Q969V1 340 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 C1orf147Q96MC9 270 aaPredicted RBP17.31■□□□□ 0.36
VPS36-203ENST00000475375 DCLRE1CQ96SD1 692 aaKnown RBP17.31■□□□□ 0.36
VPS36-203ENST00000475375 ZNF347Q96SE7 839 aa17.31■□□□□ 0.36
VPS36-203ENST00000475375 MRI1Q9BV20 369 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms