RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 EIF4E3Q8N5X7 224 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 AMER2Q8N7J2 671 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZSCAN4Q8NAM6 433 aaPredicted RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 OR6N2Q8NGY6 317 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ITFG1Q8TB96 612 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 C10orf35Q96D05 121 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 LGALS12Q96DT0 336 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 NARS2Q96I59 477 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 HPDLQ96IR7 371 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF512Q96ME7 567 aaPredicted RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 MS4A10Q96PG2 267 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 OR5B12Q96R08 314 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 NACC1Q96RE7 527 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 KATNBL1Q9H079 304 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 DHX35Q9H5Z1 703 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC25A13Q9UJS0 675 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 WDR45Q9Y484 360 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZMYM6O95789 1325 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TRAV8-7A0A075B6U6 113 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 FEZF1A0PJY2 475 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 GXYLT2A0PJZ3 443 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 A6NNC1 897 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 NPIPB6E9PJ23 425 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 SLC31A1O15431 190 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TPST1O60507 370 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 RNASEH1O60930 286 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 HSBP1O75506 76 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 FCN3O75636 299 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 FARS2O95363 451 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TMEM50AO95807 157 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 C1QBP02746 253 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 C9P02748 559 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 THY1P04216 161 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 NUDT17P0C025 328 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TSPAN19P0C672 248 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 IRF1P10914 325 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 CXCR1P25024 350 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 S100A7P31151 101 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 IFNGR2P38484 337 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 RFC3P40938 356 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TAS2R41P59536 307 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 CTXN1P60606 82 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 RPL15P61313 204 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ACVR1Q04771 509 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF616Q08AN1 781 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ARL13AQ5H913 290 aaPredicted RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 AGAP6Q5VW22 663 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 STUMQ69YW2 141 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 CCDC144NLQ6NUI1 221 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 GJB7Q6PEY0 223 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 DTWD1Q8N5C7 304 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 Q8NA96 180 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 OR1L6Q8NGR2 347 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 OR52E5Q8NH55 327 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 OR10A6Q8NH74 314 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 TRUB1Q8WWH5 349 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 GGHQ92820 318 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 CXorf40BQ96DE9 158 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 BPIFA2Q96DR5 249 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZHX1-C8orf76Q96EF9 292 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 LOXL4Q96JB6 756 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 C12orf42Q96LP6 360 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 IL4I1Q96RQ9 567 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 SHARPINQ9H0F6 387 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 DCLRE1BQ9H816 532 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF346Q9UL40 294 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 MRPS28Q9Y2Q9 187 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 COLEC10Q9Y6Z7 277 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 HSPE1-MOB4S4R3N1 261 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
SMARCE1-208ENST00000474246 SPEF2Q9C093 1822 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 A0A1W2PQD8 194 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SEC14L6B5MCN3 397 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 I3L4J1 428 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 M0R3G1 203 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MSI1O43347 362 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SYNGR4O95473 234 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 CLDN9O95484 217 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 NFATC1O95644 943 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MT-ND4P03905 459 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 ISG15P05161 165 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 BPGMP07738 259 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MYL2P10916 166 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 BCKDHBP21953 392 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 PTGS1P23219 599 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 F2RP25116 425 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 IVDP26440 423 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 RPL10P27635 214 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 ASCL1P50553 236 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 COPZ1P61923 177 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 ROM1Q03395 351 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SKP2Q13309 424 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 FHL3Q13643 280 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 TSNQ15631 228 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 TBR1Q16650 682 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 ODF4Q2M2E3 257 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SPDYE7PQ495Y7 208 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms