RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 DUX3Q96PT4 197 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZNF300Q96RE9 604 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 HSD17B14Q9BPX1 270 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CCDC77Q9BR77 488 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RBM4Q9BWF3 364 aaKnown RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 SPATA16Q9BXB7 569 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 BARHL1Q9BZE3 327 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SLITRK2Q9H156 845 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 GLT8D2Q9H1C3 349 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 SLC25A51Q9H1U9 297 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CALHM2Q9HA72 323 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZDHHC18Q9NUE0 388 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 NDE1Q9NXR1 346 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 IL37Q9NZH6 218 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 KCNG2Q9UJ96 466 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 RARRES3Q9UL19 164 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 GSTK1Q9Y2Q3 226 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 CAB39Q9Y376 341 aaPredicted RBP1.91□□□□□ -2.1
CALD1-216ENST00000473714 MAB21L2Q9Y586 359 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 PLCE1Q9P212 2302 aa1.91□□□□□ -2.1
CALD1-216ENST00000473714 ZNF407Q9C0G0 2248 aa1.9□□□□□ -2.1
CALD1-216ENST00000473714 TRBV7-9A0A0J9YWB2 115 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 A0A1B0GTH9 108 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 A0A1B0GVL5 298 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 XKRY2A2RUG3 117 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ARHGEF35A5YM69 484 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 GOLGA8OA6NCC3 632 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 FBLL1A6NHQ2 334 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 TMEM110-MUSTN1A8MSY1 372 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 GOLGA8NF8WBI6 632 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 G3V4G9 280 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TOX3O15405 576 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 SLC37A4O43826 429 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TYROBPO43914 113 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TBL1XO60907 577 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TRIM3O75382 744 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 LYPLA2O95372 231 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 CAPN1P07384 714 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 SNRPCP09234 159 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 PATE4P0C8F1 98 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF26P17031 533 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 SDC1P18827 310 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TNNI1P19237 187 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 MX1P20591 662 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ANOS1P23352 680 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 RPL4P36578 427 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 ACVR1BP36896 505 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 HPCAL1P37235 193 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ARHGDIAP52565 204 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 AP3M2P53677 418 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ATP5J2P56134 94 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 NDUFV3P56181 108 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 FKBP3Q00688 224 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 GANABQ14697 944 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF146Q15072 292 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZIC1Q15915 447 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TMEM44Q2T9K0 475 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 SLC25A35Q3KQZ1 300 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 LINC01620Q4KN68 170 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ADAMTSL4-AS1Q5T5F5 129 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ATL3Q6DD88 541 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ACSM5Q6NUN0 579 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 LEG1Q6P5S2 330 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 WDR59Q6PJI9 974 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 DNM1P46Q6ZS02 220 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 NUFIP2Q7Z417 695 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 HSD11B1LQ7Z5J1 315 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ANKRD37Q7Z713 158 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 CATSPERDQ86XM0 798 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 SLC13A5Q86YT5 568 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 CLDN19Q8N6F1 224 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF614Q8N883 585 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 CEP112Q8N8E3 955 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ATP6V0D2Q8N8Y2 350 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF557Q8N988 423 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 AQP11Q8NBQ7 271 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 OR10G6Q8NH81 332 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF671Q8TAW3 534 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 AENQ8WTP8 325 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 NPRL2Q8WTW4 380 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TRUB1Q8WWH5 349 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 OR1E3Q8WZA6 343 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 FRAT1Q92837 279 aaPredicted RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 TMA16Q96EY4 203 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 MS4A14Q96JA4 679 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ART5Q96L15 291 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 IFT74Q96LB3 600 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TBX15Q96SF7 602 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 COPS8Q99627 209 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 SLC30A2Q9BRI3 323 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 OVOL2Q9BRP0 275 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TTYH2Q9BSA4 534 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TUBGCP2Q9BSJ2 902 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 CHCHD5Q9BSY4 110 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 YY1AP1Q9H869 796 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 ZNF556Q9HAH1 456 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 EML4Q9HC35 981 aaKnown RBP1.9□□□□□ -2.11
CALD1-216ENST00000473714 TIGARQ9NQ88 270 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 NUDT4Q9NZJ9 180 aa1.9□□□□□ -2.11
CALD1-216ENST00000473714 TMEM181Q9P2C4 612 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms