RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 EEF1A1P5Q5VTE0 462 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D3CQ6IPX1 549 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 IL34Q6ZMJ4 242 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ZNF704Q6ZNC4 412 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 SKA3Q8IX90 412 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D3Q8IZP1 549 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 DUSP19Q8WTR2 217 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RASD2Q96D21 266 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR1F2PQ96R84 312 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NPAS1Q99742 590 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NRTNQ99748 197 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TSPAN10Q9H1Z9 355 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 CDCP1Q9H5V8 836 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 IL23AQ9NPF7 189 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ANKRD10Q9NXR5 420 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ADAM18Q9Y3Q7 739 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 PRUNE2Q8WUY3 3088 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 BLOC1S5-TXNDC5H3BN57 136 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ATG12O94817 140 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RLN2P04090 185 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 IFNA4P05014 189 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 NGFRP08138 427 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 DNASE1L1P49184 302 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 YPEL5P62699 121 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 PSG6Q00889 435 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ID2Q02363 134 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 PNLIPRP3Q17RR3 467 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 PLEKHN1Q494U1 663 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 ARHGAP40Q5TG30 622 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 C3orf33Q6P1S2 294 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 LRFN4Q6PJG9 635 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 LYG2Q86SG7 212 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ZNF679Q8IYX0 411 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 EXD3Q8N9H8 876 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TMEM185AQ8NFB2 350 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR51D1Q8NGF3 324 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR52B4Q8NGK2 314 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SNIP1Q8TAD8 396 aaKnown RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 STOML3Q8TAV4 291 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 ELP5Q8TE02 316 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 RNF141Q8WVD5 230 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 FAM131CQ96AQ9 280 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 Q96M85 177 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 VSTM2LQ96N03 204 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 OR8B4Q96RC9 309 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 VRK1Q99986 396 aaPredicted RBP5.56□□□□□ -1.52
HERC4-209ENST00000473533 RNF208Q9H0X6 261 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SLC6A17Q9H1V8 727 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SYNPO2LQ9H987 977 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 SFXN1Q9H9B4 322 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 FBXO34Q9NWN3 711 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 WBP1LQ9NX94 342 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 GPR160Q9UJ42 338 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 MKL2Q9ULH7 1088 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 TRPM6Q9BX84 2022 aa5.56□□□□□ -1.52
HERC4-209ENST00000473533 COL4A2P08572 1712 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 KIR2DS5A0A0G2JLQ3 304 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 A0A0G2JNG1 304 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 POM121CA8CG34 1229 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 KIR2DS3K7RE56 304 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 DNASE2O00115 360 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 CD3DP04234 171 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ERCC1P07992 297 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 H2AFB1P0C5Y9 115 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ADRA2CP18825 462 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PVALBP20472 110 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 S1PR1P21453 382 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ACHEP22303 614 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CRABP1P29762 137 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 VIPR2P41587 438 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CX3CR1P49238 355 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 SLC17A1Q14916 467 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 KIR2DS5Q14953 304 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 C2orf76Q3KRA6 126 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 FAM78AQ5JUQ0 283 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TMEM244Q5VVB8 128 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 OR7E24Q6IFN5 339 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 MAMSTRQ6ZN01 415 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 MAMDC2Q7Z304 686 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 FAM122BQ7Z309 247 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 CACUL1Q86Y37 369 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 GTPBP8Q8N3Z3 284 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 BPIFB2Q8N4F0 458 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 DTWD2Q8NBA8 298 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 OTOSQ8NHW6 89 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 SPPL3Q8TCT6 385 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 RNF128Q8TEB7 428 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 GCDHQ92947 438 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 FAM46BQ96A09 425 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ANKRD9Q96BM1 317 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 ZNF707Q96C28 371 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 WDR89Q96FK6 387 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 EDEM2Q9BV94 578 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 MMP25Q9NPA2 562 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 TBC1D29Q9UFV1 150 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 FBXO9Q9UK97 447 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 RAB22AQ9UL26 194 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 PLEKHM1Q9Y4G2 1056 aa5.55□□□□□ -1.52
HERC4-209ENST00000473533 ARID1BQ8NFD5 2236 aaPredicted RBP5.55□□□□□ -1.52
HERC4-209ENST00000473533 OR6C74A6NCV1 312 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms