RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PPP1R2P9O14990 202 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 AKR7A2O43488 359 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 NPIPB7O75200 414 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 CLPXO76031 633 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 INSP01308 110 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 IGHV4-34P06331 123 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 SLC1A1P43005 524 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 GPR6P46095 362 aaPredicted RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 CDKN1BP46527 198 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 OR1G1P47890 313 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 RFX3P48380 749 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 MRPL19P49406 292 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 PPOXP50336 477 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 SUB1P53999 127 aaKnown RBP eCLIP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 EIF3EP60228 445 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 YWHAGP61981 247 aaKnown RBP eCLIP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 IRX3P78415 501 aaPredicted RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 PDIA2Q13087 525 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 ARFRP1Q13795 201 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 DOC2AQ14183 400 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 ITIH4Q14624 930 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 NSDHLQ15738 373 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 PPM1LQ5SGD2 360 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 GPR157Q5UAW9 335 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 TTC19Q6DKK2 380 aaPredicted RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 TWF2Q6IBS0 349 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 ANGPTL8Q6UXH0 198 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 RNF165Q6ZSG1 346 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 PDIK1LQ8N165 341 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF321PQ8N8H1 164 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 VN1R2Q8NFZ6 395 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 OR52K1Q8NGK4 314 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 RHEBL1Q8TAI7 183 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 FANK1Q8TC84 345 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 GLYATL2Q8WU03 294 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 ARPC1AQ92747 370 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 C8orf44Q96CB5 159 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 STARD4Q96DR4 205 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 FCRL1Q96LA6 429 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 POLR2J2Q9GZM3 115 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 POLR2J3Q9H1A7 115 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 NXF3Q9H4D5 531 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 SIAEQ9HAT2 523 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 UGT1A10Q9HAW8 530 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 FANCEQ9HB96 536 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 MRPL22Q9NWU5 206 aaKnown RBP2.45□□□□□ -2.02
BRCA2-202ENST00000470094 PTTG3PQ9NZH4 202 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 XCL2Q9UBD3 114 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 CNTNAP1P78357 1384 aa2.45□□□□□ -2.02
BRCA2-202ENST00000470094 TRBV6-6A0A0A6YYG2 114 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 A0A0G2JLM5 398 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 KBTBD11-OT1A0A1B0GTJ5 212 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 C12orf71A8MTZ7 269 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ERVV-1B6SEH8 477 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 TEX46H3BTG2 121 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 NDUFAB1O14561 156 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 TRAF3IP2O43734 574 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-202ENST00000470094 HUS1O60921 280 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 KLF8O95600 359 aaPredicted RBP2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ALDOBP05062 364 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 GSTM3P21266 225 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 BCKDHBP21953 392 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 COX7A1P24310 79 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 HMOX2P30519 316 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 FMO3P31513 532 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 NUDT1P36639 197 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CTRLP40313 264 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 AQP2P41181 271 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 UQCRFS1P47985 274 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 SLC11A1P49279 550 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 UGT2B15P54855 530 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 EBI3Q14213 229 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 HIKESHIQ53FT3 197 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 XKR4Q5GH76 650 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 SOHLH1Q5JUK2 328 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CASC10Q5T4H9 136 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CTRB2Q6GPI1 263 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ANKRD26P1Q6NSI1 321 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 MICU2Q8IYU8 434 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 LIX1Q8N485 282 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 MARCH1Q8TCQ1 289 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 SLC7A13Q8TCU3 470 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 BLOC1S5Q8TDH9 187 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CXorf40AQ8TE69 158 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 GPX8Q8TED1 209 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 SGK3Q96BR1 496 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 RPUSD4Q96CM3 377 aaKnown RBP2.44□□□□□ -2.02
BRCA2-202ENST00000470094 PRRC1Q96M27 445 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 GSDMAQ96QA5 445 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 RARRES2Q99969 163 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ANKRD60Q9BZ19 345 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CYP3A43Q9HB55 503 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 LYRM4Q9HD34 91 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CCNB1IP1Q9NPC3 277 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 MTCH1Q9NZJ7 389 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CLCF1Q9UBD9 225 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 PEF1Q9UBV8 284 aaKnown RBP2.44□□□□□ -2.02
BRCA2-202ENST00000470094 CLN8Q9UBY8 286 aa2.44□□□□□ -2.02
BRCA2-202ENST00000470094 ZNF225Q9UK10 706 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms