RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 CDKN2AP42771 156 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 KIR2DL2P43627 348 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 BLVRAP53004 296 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CDH11P55287 796 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SH3BGRP55822 239 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ADARB1P78563 741 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FMODQ06828 376 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FOXF2Q12947 444 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 MED21Q13503 144 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SLC25A35Q3KQZ1 300 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 TSPO2Q5TGU0 170 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 MEDAGQ5VYS4 303 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FBXW9Q5XUX1 488 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 VWA1Q6PCB0 445 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 TFAP2EQ6VUC0 442 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SEM1Q6ZVN7 128 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 NCCRP1Q6ZVX7 275 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 BTLAQ7Z6A9 289 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 THAP5Q7Z6K1 395 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 MRGPRGQ86SM5 289 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CCDC71Q8IV32 467 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CPOQ8IVL8 374 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 C20orf196Q8IYI0 205 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 TMEM123Q8N131 208 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 MARVELD2Q8N4S9 558 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ZIC4Q8N9L1 334 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 NAXEQ8NCW5 288 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 MUS81Q96NY9 551 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 DMRTA2Q96SC8 542 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ANKRD60Q9BZ19 345 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 LINC00470Q9BZP3 86 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 RACGAP1Q9H0H5 632 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 OPN3Q9H1Y3 402 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 KCNN2Q9H2S1 579 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SEC61A2Q9H9S3 476 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 CRLF2Q9HC73 371 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SRA1Q9HD15 236 aaKnown RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 DNAJC27Q9NZQ0 273 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 VSX1Q9NZR4 365 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 Q9UFV3 132 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ERRFI1Q9UJM3 462 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 ING1Q9UK53 422 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDAC6-216ENST00000468949 RNF6Q9Y252 685 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 FKBP7Q9Y680 259 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 LRRK2Q5S007 2527 aa7.18□□□□□ -1.26
HDAC6-216ENST00000468949 SVILO95425 2214 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 DOPEY2Q9Y3R5 2298 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 KIAA1549Q9HCM3 1950 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SPENQ96T58 3664 aaKnown RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 DLGAP1O14490 977 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MSTNO14793 375 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SIAH2O43255 324 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 DHHO43323 396 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 UPK3AO75631 287 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 TNFSF13O75888 250 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF432O94892 652 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 TOXO94900 526 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 GYPBP06028 91 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 CD8BP10966 210 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 ZNF823P16415 610 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SPI1P17947 270 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MPGP29372 298 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 FMO3P31513 532 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 CAPZA2P47755 286 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 ASCL1P50553 236 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SLC25A1P53007 311 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SNRPGP62308 76 aaKnown RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 RUNX1T1Q06455 604 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 POU4F2Q12837 409 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 APOFQ13790 326 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MAD2L1BPQ15013 274 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 GUSBP1Q15486 140 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 CEACAM16Q2WEN9 425 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SLC35D3Q5M8T2 416 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 C9orf135Q5VTT2 229 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 NXNL2Q5VZ03 156 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 Q6ZT83 130 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 GLB1L2Q8IW92 636 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 ENTHD1Q8IYW4 607 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 NPEPL1Q8NDH3 523 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 TMEM54Q969K7 222 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MCHR2Q969V1 340 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 STARD4Q96DR4 205 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 CCDC120Q96HB5 630 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 FOXB1Q99853 325 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 CDADC1Q9BWV3 514 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 NUAK2Q9H093 628 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MED20Q9H944 212 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 GPR35Q9HC97 309 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 HINT3Q9NQE9 182 aaKnown RBP7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SLC7A10Q9NS82 523 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 GALNT8Q9NY28 637 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 SCN3BQ9NY72 215 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 TAS2R16Q9NYV7 291 aa7.17□□□□□ -1.26
HDAC6-216ENST00000468949 MALT1Q9UDY8 824 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms