RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 DNAJA3Q96EY1 480 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 OR2A7Q96R45 310 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 MAP3K3Q99759 626 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 USB1Q9BQ65 265 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 KLHDC3Q9BQ90 382 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 PHF7Q9BWX1 381 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 GPR27Q9NS67 375 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 RDH8Q9NYR8 311 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 ING1Q9UK53 422 aaPredicted RBP14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 LAMA1P25391 3075 aa14.3□□□□□ -0.12
TSPAN4-211ENST00000468468 TMEM212A6NML5 194 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 ZNF264O43296 627 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 GMFGO60234 142 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 MPDZO75970 2070 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 HIST1H2ABP04908 130 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 VSIG10L2P0DP72 767 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 FAUP35544 74 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 ADH7P40394 386 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 MAZP56270 477 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 EMC4Q5J8M3 183 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 HIST3H2AQ7L7L0 130 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 HDDC2Q7Z4H3 204 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 PRSS35Q8N3Z0 413 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 HIST1H2ACQ93077 130 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 SYT4Q9H2B2 425 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 SPTBP11277 2137 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 C17orf105B2RV13 164 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 H7C417 338 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 MAOBP27338 520 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 TACR3P29371 465 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 HSD17B7P56937 341 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 SMAD4Q13485 552 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 ZNF321PQ8N8H1 164 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 OR51D1Q8NGF3 324 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 OR4C16Q8NGL9 310 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 ADAMTS18Q8TE60 1221 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 TAAR8Q969N4 342 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 OR1F2PQ96R84 312 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 INTS14Q96SY0 518 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 GINS4Q9BRT9 223 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 TMEM184BQ9Y519 407 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-211ENST00000468468 MCRIP1C9JLW8 97 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RGS11O94810 467 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 UTS2O95399 124 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 CSRP1P21291 193 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 EFNB2P52799 333 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 EGR3Q06889 387 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 TDGQ13569 410 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 KCNAB1Q14722 419 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 CSRP2Q16527 193 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 NHLRC3Q5JS37 347 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 OTPQ5XKR4 325 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 LRRC69Q6ZNQ3 347 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 ST8SIA4Q92187 359 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 IGHV1OR15-9A0A0B4J2B8 117 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 UBE2QL1A1L167 161 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 SIX6O95475 246 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RLN1P04808 185 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 DMWDQ09019 674 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RIPPLY1Q0D2K3 151 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RBMS2Q15434 407 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 EEF1A1P5Q5VTE0 462 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 SLC36A1Q7Z2H8 476 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 ADGRG3Q86Y34 549 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 PM20D2Q8IYS1 436 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 AMELYQ99218 206 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 NXF5Q9H1B4 397 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 PPA2Q9H2U2 334 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 UBE2ZQ9H832 354 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 PNO1Q9NRX1 252 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 KIF25Q9UIL4 384 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 CDV3Q9UKY7 258 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 TMEM14AQ9Y6G1 99 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 GGT3PA6NGU5 568 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 IL33O95760 270 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 KIR3DL2P43630 455 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 RASGEF1BQ0VAM2 473 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 YOD1Q5VVQ6 348 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 ANKRD16Q6P6B7 361 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 POMZP3Q6PJE2 187 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 OR4D10Q8NGI6 311 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 TSEN15Q8WW01 171 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 MNTQ99583 582 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 TMPRSS13Q9BYE2 586 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 EXOSC3Q9NQT5 275 aaKnown RBP14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 SLC2A4RGQ9NR83 387 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 KCNG2Q9UJ96 466 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 GMEB2Q9UKD1 530 aa14.28□□□□□ -0.12
TSPAN4-211ENST00000468468 TUBAL3A6NHL2 446 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 CTAG2O75638 210 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 CSF1P09603 554 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 FBXO45P0C2W1 286 aa14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.12
TSPAN4-211ENST00000468468 DLX5P56178 289 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms