RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 TMEM53Q6P2H8 277 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 TBPL2Q6SJ96 375 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 ZNF730Q6ZMV8 503 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 MBOAT2Q6ZWT7 520 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 DPPA2Q7Z7J5 298 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 ZNF584Q8IVC4 421 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 CDK20Q8IZL9 346 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 SVOPLQ8N434 492 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 LRRC75AQ8NAA5 344 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 HDAC2Q92769 488 aaKnown RBP14.76□□□□□ -0.05
SSBP1-207ENST00000468267 NMD3Q96D46 503 aaKnown RBP14.76□□□□□ -0.05
SSBP1-207ENST00000468267 TNFRSF13CQ96RJ3 184 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 KCNK17Q96T54 332 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 ANKRD19PQ9H560 264 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 NMNAT1Q9HAN9 279 aaPredicted RBP14.76□□□□□ -0.05
SSBP1-207ENST00000468267 DCAF13Q9NV06 445 aaKnown RBP14.76□□□□□ -0.05
SSBP1-207ENST00000468267 ARL2BPQ9Y2Y0 163 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 CMAHPQ9Y471 501 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 FKBP7Q9Y680 259 aa14.76□□□□□ -0.05
SSBP1-207ENST00000468267 ATRQ13535 2644 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 TRAV27A0A087WT01 109 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 MGRN1O60291 552 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 IGHMP01871 453 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 GLRXP35754 106 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 SLC9A3P48764 834 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 CTXN1P60606 82 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 RPL27P61353 136 aaKnown RBP14.75□□□□□ -0.05
SSBP1-207ENST00000468267 PPP2R2BQ00005 443 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 SLC16A14Q7RTX9 510 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 OAFQ86UD1 273 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 RNF148Q8N7C7 305 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 ANKS4BQ8N8V4 417 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 OR51A7Q8NH64 312 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 C7orf34Q96L11 122 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 ALG12Q9BV10 488 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 RAB1BQ9H0U4 201 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 SMURF2Q9HAU4 748 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 NDUFAF4Q9P032 175 aa14.75□□□□□ -0.05
SSBP1-207ENST00000468267 ZNF346Q9UL40 294 aaKnown RBP14.75□□□□□ -0.05
SSBP1-207ENST00000468267 CD5LO43866 347 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 GPRIN2O60269 458 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 GMNNO75496 209 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SLC2A10O95528 541 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 TP53P04637 393 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 HSD17B1P14061 328 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 RHCEP18577 417 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 EVX1P49640 407 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 PDLIM4P50479 330 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 MRPS34P82930 218 aaKnown RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 GALK2Q01415 458 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 LOXL1Q08397 574 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 TOP3AQ13472 1001 aaPredicted RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 FXNQ16595 210 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SLC36A2Q495M3 483 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SLC25A47Q6Q0C1 308 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 TMPRSS11FQ6ZWK6 438 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 RRM2BQ7LG56 351 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 OR13C2Q8NGS9 318 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SLC7A13Q8TCU3 470 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 LRRC37BQ96QE4 947 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 GORASP2Q9H8Y8 452 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 RNF121Q9H920 327 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SIAEQ9HAT2 523 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 ARL8BQ9NVJ2 186 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 TAGLN3Q9UI15 199 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 SAMD4AQ9UPU9 718 aaKnown RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 FAM32AQ9Y421 112 aaKnown RBP14.74□□□□□ -0.05
SSBP1-207ENST00000468267 UGT2A1Q9Y4X1 527 aa14.74□□□□□ -0.05
SSBP1-207ENST00000468267 MALRD1Q5VYJ5 2156 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 IGKV1D-43A0A0B4J1Z2 117 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 A0A1W2PRQ8 180 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 H1F0P07305 194 aaKnown RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 NR2C1P13056 603 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 CDAP32320 146 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 GPR4P46093 362 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 RPS23P62266 143 aaKnown RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 FMODQ06828 376 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 CD47Q08722 323 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 DGCR6Q14129 220 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 MSMPQ1L6U9 139 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 THEM4Q5T1C6 240 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 GKAP1Q5VSY0 366 aaPredicted RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 FAM205BPQ63HN1 556 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 PODNL1Q6PEZ8 512 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 IGFN1Q86VF2 1251 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 PGAM4Q8N0Y7 254 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 ZCCHC24Q8N2G6 241 aaKnown RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 LRRC18Q8N456 261 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 FAM86B1Q8N7N1 296 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 FAM156AQ8NDB6 213 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 SLC30A7Q8NEW0 376 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 ZNF519Q8TB69 540 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 MRPL24Q96A35 216 aaKnown RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 TSPAN32Q96QS1 320 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 RBP7Q96R05 134 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 MRPL37Q9BZE1 423 aaKnown RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 C1orf198Q9H425 327 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 MYOZ1Q9NP98 299 aaPredicted RBP14.73□□□□□ -0.05
SSBP1-207ENST00000468267 CD300AQ9UGN4 299 aa14.73□□□□□ -0.05
SSBP1-207ENST00000468267 SLC7A8Q9UHI5 535 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms