RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CLIC3O95833 236 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 TPOP07202 933 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 ABOP16442 354 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 GIPRP48546 466 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 POU3F1Q03052 451 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 TMEM95Q3KNT9 176 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 C6orf52Q5T4I8 152 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF585AQ6P3V2 769 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 GFRALQ6UXV0 394 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 ADCK1Q86TW2 530 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 CD163Q86VB7 1156 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 DHRSXQ8N5I4 330 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 LRRC75AQ8NAA5 344 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 ADPRHL1Q8NDY3 354 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 OR2T33Q8NG76 320 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 ABHD3Q8WU67 409 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 C12orf43Q96C57 262 aaKnown RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 BBC3Q96PG8 261 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 NAA11Q9BSU3 229 aaPredicted RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 KATNB1Q9BVA0 655 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 IFT27Q9BW83 186 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 NCOR1P1Q9H4R4 102 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 MCTS1Q9ULC4 181 aaKnown RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 UGT2A1Q9Y4X1 527 aa6.12□□□□□ -1.43
SCAF4-204ENST00000467731 DIDO1Q9BTC0 2240 aaKnown RBP6.12□□□□□ -1.43
SCAF4-204ENST00000467731 A0A1W2PNV4 684 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZAR1LA6NP61 321 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 AQP8O94778 261 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SYNGR4O95473 234 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 PPP1R3DO95685 299 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SLC6A6P31641 620 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CTXN1P60606 82 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CDK5Q00535 292 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZP4Q12836 540 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 GINS1Q14691 196 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ABLIM2Q6H8Q1 611 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ACSM5Q6NUN0 579 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SLC27A4Q6P1M0 643 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 KRT74Q7RTS7 529 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ADGRE4PQ86SQ3 457 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TSPAN14Q8NG11 270 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 OR4Q3Q8NH05 313 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF420Q8TAQ5 688 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZPLD1Q8TCW7 415 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 RNF128Q8TEB7 428 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CHAC2Q8WUX2 184 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TFAP2CQ92754 450 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 HRASLS5Q96KN8 279 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 GPX7Q96SL4 187 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 PRRG4Q9BZD6 226 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 C6orf62Q9GZU0 229 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 NRIP3Q9NQ35 241 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 HIVEP3Q5T1R4 2406 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 E9PQ18 207 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SLC16A6O15403 523 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CYTIPO60759 359 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 VAMP5O95183 116 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TGM6O95932 706 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CD14P08571 375 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 GNAO1P09471 354 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 EDN3P14138 238 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF43P17038 809 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TMEM11P17152 192 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 NOS3P29474 1203 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 GNALP38405 381 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 HOXA1P49639 335 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SMSP52788 366 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ERVK-25P63136 954 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TOP3AQ13472 1001 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 MELKQ14680 651 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SLC17A1Q14916 467 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 AARDQ4LEZ3 155 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 C3P1Q6ZMU1 363 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 DPY19L2P2Q6ZN68 376 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 FAM122BQ7Z309 247 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 PXKQ7Z7A4 578 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 LNX2Q8N448 690 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 NKAIN3Q8N8D7 197 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF555Q8NEP9 628 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 OR52N1Q8NH53 320 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 FAM57AQ8TBR7 257 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TMIGD2Q96BF3 282 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 OXGR1Q96P68 337 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 ERMAPQ96PL5 475 aaPredicted RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TRIB1Q96RU8 372 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 C12orf57Q99622 126 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 TMEM246Q9BRR3 403 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 POLDIP3Q9BY77 421 aaKnown RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 MED29Q9NX70 200 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 CLCF1Q9UBD9 225 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 NDRG4Q9ULP0 352 aaKnown RBP6.11□□□□□ -1.43
SCAF4-204ENST00000467731 RASD1Q9Y272 281 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 IER3IP1Q9Y5U9 82 aa6.11□□□□□ -1.43
SCAF4-204ENST00000467731 SLC22A20A6NK97 555 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF716A6NP11 495 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 AHRRA9YTQ3 701 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 M0R129 80 aa6.1□□□□□ -1.43
SCAF4-204ENST00000467731 TRAF3IP2O43734 574 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms