RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 GKAP1Q5VSY0 366 aaPredicted RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 MEX3DQ86XN8 651 aaKnown RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 CLDN22Q8N7P3 220 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC30A7Q8NEW0 376 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 NOXO1Q8NFA2 376 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TMEM239Q8WW34 195 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 RASSF5Q8WWW0 418 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TMEM158Q8WZ71 300 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 YIPF5Q969M3 257 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 SGTBQ96EQ0 304 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 DENND2DQ9H6A0 471 aaPredicted RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 DUSP13Q9UII6 198 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 FBXO9Q9UK97 447 aaPredicted RBP12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 SNX13Q9Y5W8 968 aa12.66□□□□□ -0.38
ATPAF2-204ENST00000467560 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 IGHG1P01857 330 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 ERCC1P07992 297 aaPredicted RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 CDAP32320 146 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 RBM34P42696 430 aaKnown RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 CHN2P52757 468 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 CLRN1P58418 232 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 GALK2Q01415 458 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 MMEL1Q495T6 779 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 LRRC18Q8N456 261 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 CPEB3Q8NE35 698 aaKnown RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 GTF3AQ92664 365 aaKnown RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 HDAC2Q92769 488 aaKnown RBP12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 C1orf159Q96HA4 380 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 CMTM6Q9NX76 183 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 ARMCX1Q9P291 453 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 SLC7A8Q9UHI5 535 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 BAG5Q9UL15 447 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 A4GNTQ9UNA3 340 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 SPEF1Q9Y4P9 236 aa12.65□□□□□ -0.38
ATPAF2-204ENST00000467560 A0A1W2PRG6 482 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 ACADSP16219 412 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 KDELR2P33947 212 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 MAGEB1P43366 347 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 YAP1P46937 504 aaKnown RBP12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 FHL1Q13642 323 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 TMEM255AQ5JRV8 349 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 POU5F2Q8N7G0 328 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 LIPHQ8WWY8 451 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 HPS1Q92902 700 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 RACGAP1Q9H0H5 632 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 NARFLQ9H6Q4 476 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 INIPQ9NRY2 104 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
ATPAF2-204ENST00000467560 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 BBIP1A8MTZ0 92 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 FAM220BPB1ANY3 271 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 FAM157AC9JC47 383 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 MCIDASD6RGH6 385 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 J3KTA2 159 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 FFAR1O14842 300 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 RP2O75695 350 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 NPPAP01160 153 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 IGF2P01344 180 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 MAKP20794 623 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 CDH15P55291 814 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 RPS23P62266 143 aaKnown RBP12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 C10orf128Q5T292 105 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 ERICH5Q6P6B1 374 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 VTCN1Q7Z7D3 282 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 IGFN1Q86VF2 1251 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 OR2T12Q8NG77 320 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 RCN3Q96D15 328 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 TPD52L3Q96J77 140 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 MS4A5Q9H3V2 200 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 RNF121Q9H920 327 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 MAN2C1Q9NTJ4 1040 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 TAAR3PQ9P1P4 343 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 FBXL3Q9UKT7 428 aa12.63□□□□□ -0.39
ATPAF2-204ENST00000467560 IGLV3-9A0A075B6K5 115 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 SLC22A2O15244 555 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 MGRN1O60291 552 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 FARS2O95363 451 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF250P15622 560 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 THBS2P35442 1172 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 WNT5AP41221 380 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 DAP3P51398 398 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 GNGT1P63211 74 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 SELENOWP63302 87 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 HNRNPA0Q13151 305 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 TOP3AQ13472 1001 aaPredicted RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 SLC36A2Q495M3 483 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 NRN1LQ496H8 165 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms