RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TRAPPC4Q9Y296 219 aa13.7□□□□□ -0.22
TSSC4-208ENST00000467308 TMEM5Q9Y2B1 443 aa13.7□□□□□ -0.22
TSSC4-208ENST00000467308 IGHV4-61A0A0C4DH41 118 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 PRKACGP22612 351 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 TACR3P29371 465 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 DAPP51397 102 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 PRPS1P60891 318 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 SNRPD2P62316 118 aaKnown RBP13.69□□□□□ -0.22
TSSC4-208ENST00000467308 PRKCDQ05655 676 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 COX10Q12887 443 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 PGBD2Q6P3X8 592 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 CASP12Q6UXS9 341 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 RRM2BQ7LG56 351 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 CCDC103Q8IW40 242 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 PARP8Q8N3A8 854 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 ZNF540Q8NDQ6 660 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 TMEM255BQ8WV15 326 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 FBXO17Q96EF6 278 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 BOD1Q96IK1 185 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 SORCS2Q96PQ0 1159 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 UPB1Q9UBR1 384 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 ENOPH1Q9UHY7 261 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 MED31Q9Y3C7 131 aa13.69□□□□□ -0.22
TSSC4-208ENST00000467308 IGKV1D-42A0A075B6H8 117 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 DLGAP1O14490 977 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ZNF208O43345 1280 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 OR10H3O60404 316 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 EIF1BO60739 113 aaKnown RBP13.68□□□□□ -0.22
TSSC4-208ENST00000467308 NPIPB7O75200 414 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 WNT11O96014 354 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 TGFAP01135 160 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 GASTP01350 101 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 GSTM3P21266 225 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 CXCR1P25024 350 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 FPR3P25089 353 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 MPGP29372 298 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 OMPP47874 163 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 GSSP48637 474 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 LAPTM4AQ15012 233 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 TTC33Q6PID6 262 aaPredicted RBP13.68□□□□□ -0.22
TSSC4-208ENST00000467308 IZUMO2Q6UXV1 221 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 TMPRSS11FQ6ZWK6 438 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ZER1Q7Z7L7 766 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ADGRG3Q86Y34 549 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 AQP11Q8NBQ7 271 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 OR9Q2Q8NGE9 314 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 OR6S1Q8NH40 331 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 STK35Q8TDR2 534 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 LIPHQ8WWY8 451 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 FOXN4Q96NZ1 517 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ZNF184Q99676 751 aaPredicted RBP13.68□□□□□ -0.22
TSSC4-208ENST00000467308 ZNF556Q9HAH1 456 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 SMURF2Q9HAU4 748 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 SMPD3Q9NY59 655 aaPredicted RBP13.68□□□□□ -0.22
TSSC4-208ENST00000467308 MOKQ9UQ07 419 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 POFUT2Q9Y2G5 429 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 FLVCR1Q9Y5Y0 555 aa13.68□□□□□ -0.22
TSSC4-208ENST00000467308 TMED7-TICAM2A0A0A6YYA0 188 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 FZD7O75084 574 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 CDH2P19022 906 aaPredicted RBP13.67□□□□□ -0.22
TSSC4-208ENST00000467308 RAD23AP54725 363 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 UGT2B15P54855 530 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 OR2B6P58173 313 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 SLC35A1P78382 337 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 TSPAN31Q12999 210 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 CR1LQ2VPA4 569 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 TSPO2Q5TGU0 170 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 C9orf135Q5VTT2 229 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 KLHL24Q6TFL4 600 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 NRMQ8IXM6 262 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 GALNT4Q8N4A0 578 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 MAGEE2Q8TD90 523 aaPredicted RBP13.67□□□□□ -0.22
TSSC4-208ENST00000467308 GNPDA2Q8TDQ7 276 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 OBP2BQ9NPH6 170 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 MEPEQ9NQ76 525 aaPredicted RBP13.67□□□□□ -0.22
TSSC4-208ENST00000467308 PAPOLBQ9NRJ5 636 aaKnown RBP13.67□□□□□ -0.22
TSSC4-208ENST00000467308 KIF17Q9P2E2 1029 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 TMED7Q9Y3B3 224 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 ORC6Q9Y5N6 252 aa13.67□□□□□ -0.22
TSSC4-208ENST00000467308 A8MVM7 634 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 E9PQ18 207 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 TCF21O43680 179 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 PAX7P23759 505 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 SERPINF1P36955 418 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 AQP4P55087 323 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 EGR4Q05215 589 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 SLC17A1Q14916 467 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 SLC46A3Q7Z3Q1 461 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 CDK20Q8IZL9 346 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 TMEM45BQ96B21 275 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 BPIFA2Q96DR5 249 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 DNAJA3Q96EY1 480 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 NAA11Q9BSU3 229 aaPredicted RBP13.66□□□□□ -0.22
TSSC4-208ENST00000467308 GABARAPL3Q9BY60 117 aa13.66□□□□□ -0.22
TSSC4-208ENST00000467308 BPESC1Q9GZL8 116 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms