RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 LRFN4Q6PJG9 635 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 BRICD5Q6PL45 260 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 LINC00114Q6XXX2 140 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 WDR88Q6ZMY6 472 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 C17orf107Q6ZR85 190 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 SLC35D2Q76EJ3 337 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 RHOUQ7L0Q8 258 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 DOK3Q7L591 496 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 SLC22A24Q8N4F4 322 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 SMYD1Q8NB12 490 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 SYT14Q8NB59 555 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 HIPK4Q8NE63 616 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 OR6X1Q8NH79 312 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 TMEM54Q969K7 222 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 MCHR1Q99705 422 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 SH3GL3Q99963 347 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 EBF4Q9BQW3 602 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 EVA1AQ9H8M9 152 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 TAS2R5Q9NYW4 299 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 GLTPQ9NZD2 209 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 SLC7A8Q9UHI5 535 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 ZNF346Q9UL40 294 aaKnown RBP8.29□□□□□ -1.08
USP39-212ENST00000465514 CORO2BQ9UQ03 480 aa8.29□□□□□ -1.08
USP39-212ENST00000465514 J3QLI3 93 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 M0R3H8 397 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 MPZL1O95297 269 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 CH25HO95992 272 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 CLPTM1O96005 669 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 KNG1P01042 644 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 OR8G3PP0DMU2 310 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 MAGEB1P43366 347 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 MRPS11P82912 194 aaKnown RBP8.28□□□□□ -1.08
USP39-212ENST00000465514 BAMBIQ13145 260 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 NPTX1Q15818 432 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 DUSP7Q16829 419 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 NKPD1Q17RQ9 610 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 AGKQ53H12 422 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 ENTPD8Q5MY95 495 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 VAX1Q5SQQ9 334 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 DCAF12L2Q5VW00 463 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 RGS7BPQ6MZT1 257 aaPredicted RBP8.28□□□□□ -1.08
USP39-212ENST00000465514 ZNF613Q6PF04 617 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 DLEU7Q6UYE1 221 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 PTOV1Q86YD1 416 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 PAQR4Q8N4S7 273 aaPredicted RBP8.28□□□□□ -1.08
USP39-212ENST00000465514 SLC30A7Q8NEW0 376 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 SLC25A28Q96A46 364 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 TMIGD2Q96BF3 282 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 C7orf26Q96N11 449 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 ARHGDIGQ99819 225 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 CITED1Q99966 193 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 RBM4BQ9BQ04 359 aaKnown RBP8.28□□□□□ -1.08
USP39-212ENST00000465514 CPPED1Q9BRF8 314 aaPredicted RBP8.28□□□□□ -1.08
USP39-212ENST00000465514 CCDC28BQ9BUN5 200 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 ZNF416Q9BWM5 594 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 OR51B6Q9H340 312 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 ZNF385DQ9H6B1 395 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 TMBIM4Q9HC24 238 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 TMEM38BQ9NVV0 291 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 TAAR3PQ9P1P4 343 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 ANGPT4Q9Y264 503 aa8.28□□□□□ -1.08
USP39-212ENST00000465514 PLXNB1O43157 2135 aa8.27□□□□□ -1.08
USP39-212ENST00000465514 LOC100653049A0A140TA62 436 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 SLC22A23A1A5C7 686 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CPSF4LA6NMK7 179 aaKnown RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 M0QX08 132 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 TIMM23O14925 209 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 DHHO43323 396 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 RNF13O43567 381 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 PLPP2O43688 288 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CHP2O43745 196 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CDC14BO60729 498 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 FMO6PO60774 539 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 ENTPD5O75356 428 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 RP2O75695 350 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 KRT34O76011 436 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 LYPD3O95274 346 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 TSPAN15O95858 294 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 OPN1SWP03999 348 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 THY1P04216 161 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 QDPRP09417 244 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CCL2P13500 99 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 SELENOVP59797 346 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 CCL8P80075 99 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 MYBPC1Q00872 1141 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 MELKQ14680 651 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 ZNF74Q16587 644 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 RUNDC3AQ59EK9 446 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 ACSM5Q6NUN0 579 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 TMEM53Q6P2H8 277 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 TTC33Q6PID6 262 aaPredicted RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 RBM45Q8IUH3 476 aaKnown RBP8.27□□□□□ -1.09
USP39-212ENST00000465514 GPR32P1Q8NGA4 272 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 OR4K5Q8NGD3 323 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 OR6T1Q8NGN1 323 aa8.27□□□□□ -1.09
USP39-212ENST00000465514 ZNF566Q969W8 418 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms