RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PTDSS2Q9BVG9 487 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 NDEL1Q9GZM8 345 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 WASF3Q9UPY6 502 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 MOKQ9UQ07 419 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 TMED7Q9Y3B3 224 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 AKAP13Q12802 2813 aa13.04□□□□□ -0.32
COL5A1-205ENST00000464187 DOCK10Q96BY6 2186 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 A0A0G2JMP0 313 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 A0A0X1KG70 313 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 A6NL46 340 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 PSMD9O00233 223 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-205ENST00000464187 SUSD5O60279 629 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 SLC25A12O75746 678 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 UCHL1P09936 223 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 CD96P40200 585 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 CASRP41180 1078 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 MAP2K3P46734 347 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 FOXF1Q12946 379 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 SPINK14Q6IE38 97 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 UBE2J2Q8N2K1 259 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 C19orf18Q8NEA5 215 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 OR4M2Q8NGB6 313 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 JSRP1Q96MG2 331 aaPredicted RBP13.03□□□□□ -0.32
COL5A1-205ENST00000464187 GNRHR2Q96P88 292 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 OR14A2Q96R54 314 aa13.03□□□□□ -0.32
COL5A1-205ENST00000464187 SMAD5Q99717 465 aaKnown RBP13.03□□□□□ -0.32
COL5A1-205ENST00000464187 TMEM72A0PK05 275 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 MEIOCA2RUB1 952 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 ETV2O00321 342 aaPredicted RBP13.02□□□□□ -0.32
COL5A1-205ENST00000464187 GATBO75879 557 aaKnown RBP13.02□□□□□ -0.32
COL5A1-205ENST00000464187 WDPCPO95876 746 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 PAHP00439 452 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 NPR2P20594 1047 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 DNASE1L1P49184 302 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 DLX5P56178 289 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 SOX8P57073 446 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 NANOS3P60323 173 aaKnown RBP13.02□□□□□ -0.32
COL5A1-205ENST00000464187 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 CEP78Q5JTW2 689 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 GPR139Q6DWJ6 353 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 UNQ9370/PRO34162Q6UXP9 181 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 SYT9Q86SS6 491 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 OR1J4Q8NGS1 313 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 TMEM41AQ96HV5 264 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.32
COL5A1-205ENST00000464187 SRA1Q9HD15 236 aaKnown RBP13.02□□□□□ -0.32
COL5A1-205ENST00000464187 TAS2R5Q9NYW4 299 aa13.02□□□□□ -0.32
COL5A1-205ENST00000464187 A0A0G2JMM0 328 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 A0A1W2PPB8 328 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 A0A1W2PRS3 328 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 TVP23AA6NH52 213 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 ZNF891A8MT65 544 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-205ENST00000464187 KIR3DP1A8MWS1 328 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 SHISA8B8ZZ34 492 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 KLK10O43240 276 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 GPRIN2O60269 458 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 NPIPB7O75200 414 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 CCNKO75909 580 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 ARL6IP5O75915 188 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 NEURL1O76050 574 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 RENP00797 406 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 APOBEC1P41238 236 aaKnown RBP13.02□□□□□ -0.33
COL5A1-205ENST00000464187 SLC25A53Q5H9E4 307 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 TIGD3Q6B0B8 471 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 MAMDC2Q7Z304 686 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-205ENST00000464187 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 OR6V1Q8N148 313 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 DTX3Q8N9I9 347 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 OR2T4Q8NH00 348 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 ENKURQ8TC29 256 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 ZC3HAV1LQ96H79 300 aaKnown RBP13.02□□□□□ -0.33
COL5A1-205ENST00000464187 MRGPRX4Q96LA9 322 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 KCNJ15Q99712 375 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 PLA2G3Q9NZ20 509 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 MED13Q9UHV7 2174 aa13.02□□□□□ -0.33
COL5A1-205ENST00000464187 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 CNTRLQ7Z7A1 2325 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 A0A0B4J293 547 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 NOTOA8MTQ0 251 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 A8MVM7 634 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 C11orf98E9PRG8 122 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 EFSO43281 561 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 TRIM3O75382 744 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-205ENST00000464187 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 OR8G3PP0DMU2 310 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 IMPDH2P12268 514 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 ATF1P18846 271 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 TCEA1P23193 301 aaKnown RBP13.01□□□□□ -0.33
COL5A1-205ENST00000464187 GPR85P60893 370 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 EEF1A1P5Q5VTE0 462 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 GLCCI1Q86VQ1 547 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 SCAIQ8N9R8 606 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 ZNF248Q8NDW4 579 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 OR6F1Q8NGZ6 308 aa13.01□□□□□ -0.33
COL5A1-205ENST00000464187 RGP1Q92546 391 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms