RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CDK10Q15131 360 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 TBRG1Q3YBR2 411 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ZNF468Q5VIY5 522 aaPredicted RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 XKRXQ6PP77 449 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 FAM131AQ6UXB0 335 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 CDC20BQ86Y33 519 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 OR6N2Q8NGY6 317 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ANGPTL6Q8NI99 470 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ABHD4Q8TB40 342 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 DMRTB1Q96MA1 342 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 TRAF4Q9BUZ4 470 aaPredicted RBP13□□□□□ -0.33
HDAC6-213ENST00000462730 SLC22A4Q9H015 551 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 ABCB9Q9NP78 766 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 NPIPA1Q9UND3 350 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 B9D1Q9UPM9 204 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 FKBP7Q9Y680 259 aa13□□□□□ -0.33
HDAC6-213ENST00000462730 EML6Q6ZMW3 1958 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 LINC00854A0A1B0GVQ3 168 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 HMX3A6NHT5 357 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 PROB1E7EW31 1015 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 PSMD9O00233 223 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 TFECO14948 347 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-213ENST00000462730 NCR1O76036 304 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 GDI2P50395 445 aaKnown RBP12.99□□□□□ -0.33
HDAC6-213ENST00000462730 SIRPAP78324 504 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 C19orf57Q0VDD7 668 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 H3F3CQ6NXT2 135 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 ASB10Q8WXI3 467 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 GHSRQ92847 366 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 INTS14Q96SY0 518 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 MMP28Q9H239 520 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 PROK2Q9HC23 129 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 ANKRD10Q9NXR5 420 aa12.99□□□□□ -0.33
HDAC6-213ENST00000462730 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
HDAC6-213ENST00000462730 A0A087WZY1 265 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 SLC22A23A1A5C7 686 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 A6NIZ1 184 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 SLC16A7O60669 478 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 IFNGR1P15260 489 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 DAP3P51398 398 aaKnown RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 GNG2P59768 71 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 RAP1BP61224 184 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 RAP1AP62834 184 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 RPL22L1Q6P5R6 122 aaKnown RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 CEACAM19Q7Z692 300 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 OR13C5Q8NGS8 318 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 AP3S1Q92572 193 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 ZBTB8AQ96BR9 441 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 SMIM19Q96E16 107 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 KLHL15Q96M94 604 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 JSRP1Q96MG2 331 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 FOXN4Q96NZ1 517 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 OR5B2Q96R09 309 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 MIXL1Q9H2W2 232 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 WDR76Q9H967 626 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 ASCL3Q9NQ33 180 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 LAMP5Q9UJQ1 280 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 IGLV1-36A0A0B4J1U3 117 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 HLA-DQA2P01906 255 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 CSF3P09919 207 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 OR8G3PP0DMU2 310 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 LIFP15018 202 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 CTLA4P16410 223 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 DPP4P27487 766 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 SHC1P29353 583 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 MTNR1BP49286 362 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 HSF1Q00613 529 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 TGIF1Q15583 401 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 ACER2Q5QJU3 275 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 SLC35D2Q76EJ3 337 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 FAM220AQ7Z4H9 259 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 MDGA2Q7Z553 956 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 MS4A15Q8N5U1 240 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 PSMF1Q92530 271 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 MED30Q96HR3 178 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 RNF32Q9H0A6 362 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 B3GALT5Q9Y2C3 310 aa12.98□□□□□ -0.33
HDAC6-213ENST00000462730 RPH3AQ9Y2J0 694 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-213ENST00000462730 TRBV2A0A0J9YWF9 115 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 FABP12A6NFH5 140 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 FZD7O75084 574 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 ADH6P28332 368 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 SFTPDP35247 375 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 RPS27P42677 84 aaKnown RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 DCAF10Q5QP82 559 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 DPY19L4Q7Z388 723 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 BEST3Q8N1M1 668 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms