RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTTY12Q9BZ98 90 aa8□□□□□ -1.13
VPS50-207ENST00000458530 YIPF3Q9GZM5 350 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ADGRL4Q9HBW9 690 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ASB6Q9NWX5 421 aa8□□□□□ -1.13
VPS50-207ENST00000458530 ERVK13-1Q9NX77 482 aa8□□□□□ -1.13
VPS50-207ENST00000458530 VSX1Q9NZR4 365 aaPredicted RBP8□□□□□ -1.13
VPS50-207ENST00000458530 LSM2Q9Y333 95 aaKnown RBP8□□□□□ -1.13
VPS50-207ENST00000458530 F8P00451 2351 aa8□□□□□ -1.13
VPS50-207ENST00000458530 A0A1W2PNR3 127 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 WIPF3A6NGB9 483 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZNF726A6NNF4 738 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 HSPB2A8KAH6 182 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 NPIPA2E9PIF3 369 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 NPIPA3F8WFD2 350 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 MS4A18H0YCH9 400 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 J3QRE1 110 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 AIREO43918 545 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 EFNA2O43921 213 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 APOL3O95236 402 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 F10P00742 488 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 IGHG1P01857 330 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 GYPBP06028 91 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 LIMS3P0CW19 117 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 LIMS4P0CW20 117 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 IFNGR1P15260 489 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 CPEP16870 476 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 IL11P20809 199 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 ENPP1P22413 925 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SERPINB10P48595 397 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 CCL11P51671 97 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 CLRN1P58418 232 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 RAC3P60763 192 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 RPS3AP61247 264 aaKnown RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 GLO1Q04760 184 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 FOXO1Q12778 655 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 KLRB1Q12918 225 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 GPR50Q13585 617 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 TRAM1Q15629 374 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 HSPB2Q16082 182 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 TSTQ16762 297 aaKnown RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 DEFB109BQ30KR1 87 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 MS4A18Q3C1V0 323 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 RNFT1Q5M7Z0 435 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 HBMQ6B0K9 141 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZNF322Q6U7Q0 402 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 IGFL2Q6UWQ7 119 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SHFQ7M4L6 423 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SLC16A9Q7RTY1 509 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 FAM220AQ7Z4H9 259 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 GALNTL5Q7Z4T8 443 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 YRDCQ86U90 279 aaKnown RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 GPAT4Q86UL3 456 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SYS1Q8N2H4 156 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 FAM109AQ8N4B1 249 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 TMEM99Q8N816 258 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZFP62Q8NB50 900 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 OR5M1Q8NGP8 315 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 CPNE4Q96A23 557 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZMYND19Q96E35 227 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 DNAJA3Q96EY1 480 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 RBP7Q96R05 134 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 OR5M11Q96RB7 305 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 INTS14Q96SY0 518 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 DDOQ99489 341 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 NPAS1Q99742 590 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 COQ7Q99807 217 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SF3B5Q9BWJ5 86 aaKnown RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 SYT4Q9H2B2 425 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZNF552Q9H707 407 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 ZNF71Q9NQZ8 489 aaPredicted RBP7.99□□□□□ -1.13
VPS50-207ENST00000458530 DEPPQ9NTK1 212 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 NDUFB11Q9NX14 153 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 TAS2R16Q9NYV7 291 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 PLA2G3Q9NZ20 509 aa7.99□□□□□ -1.13
VPS50-207ENST00000458530 SHANK1Q9Y566 2161 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 MTORP42345 2549 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 SLC22A23A1A5C7 686 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 EIF1AYO14602 144 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 KHDRBS3O75525 346 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 CEACAM4O75871 244 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 GLSO94925 669 aaPredicted RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 ACTL6AO96019 429 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 HLA-DQA2P01906 255 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 MRPL3P09001 348 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 TACSTD2P09758 323 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 CLUP10909 449 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 CD53P19397 219 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 GABRA5P31644 462 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 PYCR1P32322 319 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 TGFBR2P37173 567 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 LIPAP38571 399 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 UQCRFS1P47985 274 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 TNFSF10P50591 281 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 AGFG1P52594 562 aaKnown RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 GBX2P52951 348 aaPredicted RBP7.98□□□□□ -1.13
VPS50-207ENST00000458530 BIDP55957 195 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 CARD18P57730 90 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 B3GALT5-AS1P59052 145 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 TUBA1BP68363 451 aa7.98□□□□□ -1.13
VPS50-207ENST00000458530 MELKQ14680 651 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms