RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PTGDSP41222 190 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 NR4A2P43354 598 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 BIDP55957 195 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 HSF1Q00613 529 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 Q499Y3 187 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 CARD17Q5XLA6 110 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 LYPD8Q6UX82 237 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 FCRLAQ7L513 359 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 PRSS35Q8N3Z0 413 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 FRMD6Q96NE9 622 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 GFI1Q99684 422 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 RNF121Q9H920 327 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 SDHAF3Q9NRP4 125 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 IGLV1-36A0A0B4J1U3 117 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 PNPP00491 289 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 RBMS1P29558 406 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 PLPPR5Q32ZL2 321 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 SLC18B1Q6NT16 456 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 ZNF544Q6NX49 715 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 FAM198BQ6UWH4 519 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 SCAIQ8N9R8 606 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 DTWD2Q8NBA8 298 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 MFSD8Q8NHS3 518 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 UBL7Q96S82 380 aaPredicted RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 ABCG5Q9H222 651 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 CDCP1Q9H5V8 836 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 LIN7BQ9HAP6 207 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 CHST11Q9NPF2 352 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 CENPMQ9NSP4 180 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 NUFIP1Q9UHK0 495 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 HS3ST3B1Q9Y662 390 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 IGHV1-45A0A0A0MS14 117 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 IFITM5A6NNB3 132 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 NAGAP17050 411 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 OTX2P32243 289 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 MPLP40238 635 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TOMM20Q15388 145 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TMEM176BQ3YBM2 270 aaPredicted RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 PEAR1Q5VY43 1037 aaPredicted RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 UNQ9370/PRO34162Q6UXP9 181 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 STAC2Q6ZMT1 411 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TMPRSS12Q86WS5 348 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TMEM156Q8N614 296 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 POC1BQ8TC44 478 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 ELP5Q8TE02 316 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 GNRHR2Q96P88 292 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 CMKLR1Q99788 373 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 ABHD6Q9BV23 337 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 SLITRK2Q9H156 845 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 RBFOX1Q9NWB1 397 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 MRPL15Q9P015 296 aaKnown RBP10.57□□□□□ -0.72
VTA1-203ENST00000452973 N6AMT1Q9Y5N5 214 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 V9GY05 133 aa10.57□□□□□ -0.72
VTA1-203ENST00000452973 TRAV8-7A0A075B6U6 113 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 OR4C45A6NMZ5 311 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 H0YC42 278 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 SLC43A1O75387 559 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ZNF823P16415 610 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 RGS19P49795 217 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 DGCR2P98153 550 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 EGR3Q06889 387 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 CAMK2DQ13557 499 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 NTRK2Q16620 822 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 TBRG1Q3YBR2 411 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 LRFN4Q6PJG9 635 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 WDSUB1Q8N9V3 476 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ZBTB8BQ8NAP8 495 aaPredicted RBP10.56□□□□□ -0.72
VTA1-203ENST00000452973 WDR54Q9H977 334 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 SERINC1Q9NRX5 453 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 VSX1Q9NZR4 365 aaPredicted RBP10.56□□□□□ -0.72
VTA1-203ENST00000452973 NXT1Q9UKK6 140 aaKnown RBP10.56□□□□□ -0.72
VTA1-203ENST00000452973 FBXL3Q9UKT7 428 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 RTTNQ86VV8 2226 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 NSG1A0A0A6YYJ2 146 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 A0A0B4J293 547 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 LIPT2A6NK58 231 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ANXA2P2A6NMY6 339 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ANXA2P07355 339 aaKnown RBP10.56□□□□□ -0.72
VTA1-203ENST00000452973 PTHLHP12272 177 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 KLK2P20151 261 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 CRABP1P29762 137 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 MC2RQ01718 297 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 STPG1Q5TH74 334 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 TMEM225Q6GV28 225 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 C5orf46Q6UWT4 87 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 CMTM4Q8IZR5 234 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ITPKCQ96DU7 683 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 OR8B4Q96RC9 309 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 SEC61A2Q9H9S3 476 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 ABRACLQ9P1F3 81 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 EXPH5Q8NEV8 1989 aa10.56□□□□□ -0.72
VTA1-203ENST00000452973 TP53I11O14683 189 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 COX6A1P12074 109 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 KIR3DL2P43630 455 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 SUMO3P55854 103 aaPredicted RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 MFGE8Q08431 387 aaPredicted RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 GPR176Q14439 515 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms