RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	TFG	Q92734	400 aa	Predicted RBP	6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	SMARCD1	Q96GM5	515 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	HRASLS5	Q96KN8	279 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	THUMPD3	Q9BV44	507 aa	Known RBP	6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	RIOK2	Q9BVS4	552 aa	Known RBP	6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	POMK	Q9H5K3	350 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	G6PC2	Q9NQR9	355 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	MTCH1	Q9NZJ7	389 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	STEAP1	Q9UHE8	339 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ADAM29	Q9UKF5	820 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	CCL27	Q9Y4X3	112 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	FLVCR1	Q9Y5Y0	555 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	GGT3P	A6NGU5	568 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	C1QTNF3-AMACR	E9PGA6	284 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	SIVA1	O15304	175 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	BCL2L11	O43521	198 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	LEFTY1	O75610	366 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	DIRAS1	O95057	198 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	TOMM40	O96008	361 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	HPRT1	P00492	218 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	TRGC2	P03986	189 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	DCN	P07585	359 aa	Known RBP	6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	TRGC1	P0CF51	173 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	TNFSF4	P23510	183 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	DPP4	P27487	766 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	IL12B	P29460	328 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	PGGT1B	P53609	377 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	BTN3A2	P78410	334 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ST3GAL3	Q11203	375 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	TMEM249	Q2WGJ8	235 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	C2orf76	Q3KRA6	126 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	C4orf17	Q53FE4	359 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	IZUMO1	Q8IYV9	350 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF738	Q8NE65	137 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	C11orf40	Q8WZ69	217 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	MCHR2	Q969V1	340 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	SNX22	Q96L94	193 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	SLC46A1	Q96NT5	459 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR5B2	Q96R09	309 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR6C1	Q96RD1	312 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	REEP2	Q9BRK0	252 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ANGPTL4	Q9BY76	406 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	CNTNAP3	Q9BZ76	1288 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR8D2	Q9GZM6	311 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ADGRL4	Q9HBW9	690 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	RBM22	Q9NW64	420 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	DDIT4	Q9NX09	232 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	SLC2A8	Q9NY64	477 aa		6.2	□□□□□ -1.42
TRIM6-205	ENST00000445329	ASPDH	A6ND91	283 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329		E7EQ34	232 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329		F5H0A9	414 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	GOSR2	O14653	212 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	FGF16	O43320	207 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	SCGB1D1	O95968	90 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TK1	P04183	234 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	UNG	P13051	313 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	GTF2F2	P13984	249 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ANOS1	P23352	680 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	AKT2	P31751	481 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	GAS1	P54826	345 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	H2BFS	P57053	126 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	RPL7A	P62424	266 aa	Known RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF252P-AS1	Q0IIN9	211 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ABHD18	Q0P651	414 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	SHH	Q15465	462 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZNF750	Q32MQ0	723 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ALKBH6	Q3KRA9	238 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	OVOS1	Q6IE37	1185 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	REEP3	Q6NUK4	255 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	NPNT	Q6UXI9	565 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	VTCN1	Q7Z7D3	282 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	RTN4RL2	Q86UN3	420 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZDHHC21	Q8IVQ6	265 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TMEM130	Q8N3G9	435 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	LMNTD1	Q8N9Z9	388 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TMEM161B	Q8NDZ6	487 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR2T12	Q8NG77	320 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	OR4E2	Q8NGC2	313 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	HMGB4	Q8WW32	186 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	SOCS4	Q8WXH5	440 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	SFRP2	Q96HF1	295 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	DPH1	Q9BZG8	443 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	MTHFD2L	Q9H903	347 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ZMAT3	Q9HA38	289 aa	Known RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TNFSF18	Q9UNG2	199 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TNFRSF18	Q9Y5U5	241 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	C3orf70	A6NLC5	250 aa	Predicted RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	MFNG	O00587	321 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	GRM6	O15303	877 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	SLC16A5	O15375	505 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	TGFB1I1	O43294	461 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	PDYN	P01213	254 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	WNT1	P04628	370 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	AVPR1A	P37288	418 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	POLR2H	P52434	150 aa	Known RBP	6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	ART1	P52961	327 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	CKS1B	P61024	79 aa		6.19	□□□□□ -1.42
TRIM6-205	ENST00000445329	CSNK2A1	P68400	391 aa	Predicted RBP	6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms