RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TSPAN31Q12999 210 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 GSG1Q2KHT4 349 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 HIKESHIQ53FT3 197 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 C1orf146Q5VVC0 180 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 TSEN54Q7Z6J9 526 aaKnown RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 ARIH2OSQ8N7S6 290 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 WDR31Q8NA23 367 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 GTPBP3Q969Y2 492 aaKnown RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 SLC38A2Q96QD8 506 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 GPX7Q96SL4 187 aaPredicted RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 WACQ9BTA9 647 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 TEX12Q9BXU0 123 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 PLEKHF2Q9H8W4 249 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 ZNF556Q9HAH1 456 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 SRA1Q9HD15 236 aaKnown RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 ETAA1Q9NY74 926 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 SIGLEC7Q9Y286 467 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 LYVE1Q9Y5Y7 322 aa10.73□□□□□ -0.69
LTBR-204ENST00000444814 ANKHD1Q8IWZ3 2542 aaKnown RBP10.73□□□□□ -0.69
LTBR-204ENST00000444814 ABCD4O14678 606 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 IMPA2O14732 288 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 DEAF1O75398 565 aaPredicted RBP10.72□□□□□ -0.69
LTBR-204ENST00000444814 CD79AP11912 226 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 FCGR1AP12314 374 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 CBR1P16152 277 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 LIMS1P48059 325 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 CDH11P55287 796 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 PCBD1P61457 104 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 PLP2Q04941 152 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 IQCCQ4KMZ1 466 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 C1orf94Q6P1W5 598 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 SEZ6L2Q6UXD5 910 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 NHLRC1Q6VVB1 395 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 ZNF611Q8N823 705 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 OR4F15Q8NGB8 312 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 TMEM171Q8WVE6 324 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 AKAP1Q92667 903 aaKnown RBP eCLIP10.72□□□□□ -0.69
LTBR-204ENST00000444814 MCHR2Q969V1 340 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 MBD6Q96DN6 1003 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 CCL19Q99731 98 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 CADM1Q9BY67 442 aaKnown RBP10.72□□□□□ -0.69
LTBR-204ENST00000444814 MRPL13Q9BYD1 178 aaKnown RBP10.72□□□□□ -0.69
LTBR-204ENST00000444814 RNF121Q9H920 327 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
LTBR-204ENST00000444814 ZNF346Q9UL40 294 aaKnown RBP10.72□□□□□ -0.69
LTBR-204ENST00000444814 A0A1W2PR80 420 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 ARRDC5A6NEK1 342 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 CDC42EP2O14613 210 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 ARHGEF9O43307 516 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 RENP00797 406 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 FOXG1P55316 489 aaPredicted RBP10.71□□□□□ -0.69
LTBR-204ENST00000444814 ERVK-25P63136 954 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 LGALS3BPQ08380 585 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 KRR1Q13601 381 aaKnown RBP10.71□□□□□ -0.69
LTBR-204ENST00000444814 SEC23BQ15437 767 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 MICAQ29983 383 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 RFX4Q33E94 735 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 C10orf128Q5T292 105 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 AGAP6Q5VW22 663 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 ADGRG5Q8IZF4 528 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 SLC22A24Q8N4F4 322 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 SYT14Q8NB59 555 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 OR1J2Q8NGS2 313 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 CANT1Q8WVQ1 401 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 DNAJC9Q8WXX5 260 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 FUZQ9BT04 418 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 CCNB1IP1Q9NPC3 277 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 SLC7A8Q9UHI5 535 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 BAIAP2Q9UQB8 552 aa10.71□□□□□ -0.69
LTBR-204ENST00000444814 MPDZO75970 2070 aa10.71□□□□□ -0.7
LTBR-204ENST00000444814 IQCMA0A1B0GVH7 501 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 TCRBV3S1A0A5B6 114 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 DPRXA6NFQ7 191 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 SMPD2O60906 423 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 PTP4A3O75365 173 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 B4GALT1P15291 398 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 CRABP1P29762 137 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 GSSP48637 474 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 ZNF133P52736 654 aaPredicted RBP10.7□□□□□ -0.7
LTBR-204ENST00000444814 KRTAP10-9P60411 292 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 MRPS34P82930 218 aaKnown RBP10.7□□□□□ -0.7
LTBR-204ENST00000444814 HIST3H3Q16695 136 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 ZNF672Q499Z4 452 aaPredicted RBP10.7□□□□□ -0.7
LTBR-204ENST00000444814 ZNF544Q6NX49 715 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 C22orf34Q6ZV56 151 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 LINGO2Q7L985 606 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 SLC16A14Q7RTX9 510 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 FBXL14Q8N1E6 418 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 CLDN22Q8N7P3 220 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 LRRC75AQ8NAA5 344 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 GIPC3Q8TF64 312 aa10.7□□□□□ -0.7
LTBR-204ENST00000444814 TRMT61AQ96FX7 289 aaKnown RBP10.7□□□□□ -0.7
LTBR-204ENST00000444814 RAB3IPQ96QF0 476 aaPredicted RBP10.7□□□□□ -0.7
LTBR-204ENST00000444814 KCNK17Q96T54 332 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms