RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 PDCD1Q15116 288 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 NPTX1Q15818 432 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 NIPAL3Q6P499 406 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 CREB3L2Q70SY1 520 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 LINC00471Q8N535 108 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 ZIC4Q8N9L1 334 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OR10H5Q8NGA6 315 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OR4D11Q8NGI4 311 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 MFSD8Q8NHS3 518 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 ADAMTS16Q8TE57 1224 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 EME1Q96AY2 570 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 KTI12Q96EK9 354 aaPredicted RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SLC41A3Q96GZ6 507 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 EPYCQ99645 322 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 C9orf16Q9BUW7 83 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 FKRPQ9H9S5 495 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 C8orf4Q9NR00 106 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 KIF17Q9P2E2 1029 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 AMDHD2Q9Y303 409 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 RAI1Q7Z5J4 1906 aaPredicted RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 HEATR1Q9H583 2144 aaKnown RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 A0A1B0GWA3 101 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OR6C65A6NJZ3 312 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OVOL3O00110 214 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 PDLIM1O00151 329 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 CHP2O43745 196 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 NPIPB7O75200 414 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 BMP4P12644 408 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 HOXB4P17483 251 aaPredicted RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 TTKP33981 857 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SELENOPP49908 381 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 UBE2NP61088 152 aaKnown RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SPOCK1Q08629 439 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 TNK1Q13470 666 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OR1Q1Q15612 314 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 HIKESHIQ53FT3 197 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 ANKRD39Q53RE8 183 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 FAM69AQ5T7M9 428 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 HMBOX1Q6NT76 420 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 ULK3Q6PHR2 472 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 C5orf46Q6UWT4 87 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 RRM2BQ7LG56 351 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 AMIGO2Q86SJ2 522 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 HIPK1Q86Z02 1210 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 RBM45Q8IUH3 476 aaKnown RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 ZDHHC13Q8IUH4 622 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 FBXL14Q8N1E6 418 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 MUC15Q8N387 334 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 OR5K1Q8NHB7 308 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SLC38A4Q969I6 547 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 NRBF2Q96F24 287 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 KCNS3Q9BQ31 491 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 PRR14Q9BWN1 585 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SEMA6AQ9H2E6 1030 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 SLC17A5Q9NRA2 495 aa7.67□□□□□ -1.18
USP6NL-203ENST00000443016 PAPOLBQ9NRJ5 636 aaKnown RBP7.67□□□□□ -1.18
USP6NL-203ENST00000443016 J3KTA2 159 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 TP53P04637 393 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 CBLP22681 906 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 PCSK6P29122 969 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ACVR1BP36896 505 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 IFNGR2P38484 337 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 FABP6P51161 128 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 CLDN17P56750 224 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 EGR4Q05215 589 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 DGCR6Q14129 220 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 RAB35Q15286 201 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 C10orf53Q8N6V4 93 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 DHRS9Q9BPW9 319 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 TRAF4Q9BUZ4 470 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 OSBPL10Q9BXB5 764 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 NMNAT1Q9HAN9 279 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 C12orf10Q9HB07 376 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 A4GNTQ9UNA3 340 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 LYVE1Q9Y5Y7 322 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ATP23Q9Y6H3 246 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ABCA1O95477 2261 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 A0A0B4J2E0 115 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 A0A1B0GX12 115 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 FTCDNL1E5RQL4 147 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 E7EQL1 145 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 M0R082 166 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 NDUFS7O75251 213 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 PRSS23O95084 383 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 HTR3BO95264 441 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 RPLP1P05386 114 aaKnown RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 HTR2AP28223 471 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 IQCCQ4KMZ1 466 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 WDR31Q8NA23 367 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 MAPK1IP1LQ8NDC0 245 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF417Q8TAU3 575 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 DHRS1Q96LJ7 313 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ADAD1Q96M93 576 aaKnown RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 ZNF587Q96SQ5 575 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 CACNG6Q9BXT2 260 aa7.66□□□□□ -1.18
USP6NL-203ENST00000443016 RSPO3Q9BXY4 272 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 BARX1Q9HBU1 254 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-203ENST00000443016 OBP2BQ9NPH6 170 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms