RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MCRIP1C9JLW8 97 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 TOR1AO14656 332 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CTAG2O75638 210 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 GPANK1O95872 356 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 HLA-DQA2P01906 255 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CSRP1P21291 193 aaKnown RBP14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CAPZBP47756 277 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 KIAA0895LQ68EN5 471 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 ZNF321PQ8N8H1 164 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 PTPMT1Q8WUK0 201 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 SLC46A1Q96NT5 459 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 ELF4Q99607 663 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 SOHLH2Q9NX45 425 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CLEC1BQ9P126 229 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 ING1Q9UK53 422 aaPredicted RBP14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 PLCL2Q9UPR0 1127 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 GMFGO60234 142 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 RLN1P04808 185 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CXCR1P25024 350 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CD1CP29017 333 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 CCKBRP32239 447 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 RORAP35398 523 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 SLC6A8P48029 635 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 POU3F4P49335 361 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 WDR38Q5JTN6 314 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 NHLRC1Q6VVB1 395 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 LRRC69Q6ZNQ3 347 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 ADGRG3Q86Y34 549 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 LRRC61Q9BV99 259 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 OR8D2Q9GZM6 311 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 ADAM19Q9H013 955 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 NKX2-4Q9H2Z4 354 aa14.93□□□□□ -0.02
SEMA3B-207ENST00000441915 H0YIG0 161 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 HCRTR2O43614 444 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 NDUFA2O43678 99 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 CCR5P51681 352 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 DLX2Q07687 328 aaPredicted RBP14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 POMZP3Q6PJE2 187 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 RBPMSQ93062 196 aaKnown RBP14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 ZNF285Q96NJ3 590 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 AMELYQ99218 206 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 LAT2Q9GZY6 243 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 PPA2Q9H2U2 334 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 ELOVL3Q9HB03 270 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 CYP8B1Q9UNU6 501 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 TMEM131Q92545 1883 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 C10orf142B7Z368 130 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 C11orf98E9PRG8 122 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 CDC40O60508 579 aaKnown RBP eCLIP14.92□□□□□ -0.023e-7■□□□□ 10
SEMA3B-207ENST00000441915 PROS1P07225 676 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 ITGA5P08648 1049 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 VSIG10L2P0DP72 767 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 KIR3DL2P43630 455 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 EFNB2P52799 333 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 DMWDQ09019 674 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 SHHQ15465 462 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 MEP1BQ16820 701 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 OR6N1Q8NGY5 312 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 METTL21AQ8WXB1 218 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 DNAJA3Q96EY1 480 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 KLHDC3Q9BQ90 382 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 OPN4Q9UHM6 478 aa14.92□□□□□ -0.02
SEMA3B-207ENST00000441915 TRAV18A0A075B6X5 111 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 CHURC1-FNTBB4DL54 471 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 RGS11O94810 467 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 HOXD4P09016 255 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 GTF2F2P13984 249 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 CFPP27918 469 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 FNTBP49356 437 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 SEC61A1P61619 476 aaKnown RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 SLC36A1Q7Z2H8 476 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 PRR22Q8IZ63 422 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 PNPLA2Q96AD5 504 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 WDR89Q96FK6 387 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 KLHDC7BQ96G42 594 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 OR1F2PQ96R84 312 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 OR8B4Q96RC9 309 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 GAL3ST4Q96RP7 486 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 SLC38A3Q99624 504 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 GPR27Q9NS67 375 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 FRG2CA6NGY1 282 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 ICOSLGO75144 302 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 AKAIN1P0CW23 69 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 S100A11P31949 105 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 PRSS3P35030 304 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 CENPAP49450 140 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 ZNF117Q03924 483 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 BAMBIQ13145 260 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 CSRP2Q16527 193 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 YOD1Q5VVQ6 348 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 SLC35D2Q76EJ3 337 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 TMEM151BQ8IW70 566 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 OR4D10Q8NGI6 311 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 OR5M1Q8NGP8 315 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 FAM3DQ96BQ1 224 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 C8orf33Q9H7E9 229 aaPredicted RBP14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 GTF2A1LQ9UNN4 478 aa14.91□□□□□ -0.02
SEMA3B-207ENST00000441915 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms