RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PCBP4P57723 403 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ADAM8P78325 824 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 RPP30P78346 268 aaKnown RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GAS6Q14393 721 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 FAM46CQ5VWP2 391 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 OR4C11Q6IEV9 310 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 FAM111BQ6SJ93 734 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 LCTLQ6UWM7 567 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 STAC2Q6ZMT1 411 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF574Q6ZN55 896 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 ASPGQ86U10 573 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-214ENST00000441542 GLYATL1Q969I3 302 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 MOAP1Q96BY2 351 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 PLD4Q96BZ4 506 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 RASD2Q96D21 266 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SYT4Q9H2B2 425 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 TNFSF18Q9UNG2 199 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 SLC35A3Q9Y2D2 325 aa6.87□□□□□ -1.31
HDAC9-214ENST00000441542 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 RNASEK-C17orf49H0YIS7 233 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 BHLHE40O14503 412 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 RCBTB2O95199 551 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TBX6O95947 436 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FBP1P09467 338 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 H2AFB1P0C5Y9 115 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TSFMP43897 325 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CXADRP78310 365 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF616Q08AN1 781 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 NOGQ13253 232 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 KIAA0141Q14154 515 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 PON3Q15166 354 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SLC9A3R2Q15599 337 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 DECR1Q16698 335 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 RNF212Q495C1 297 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SLC22A6Q4U2R8 563 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 COL13A1Q5TAT6 717 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF793Q6ZN11 406 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 OVCH1Q7RTY7 1134 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 MRGPREQ86SM8 312 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TMEFF1Q8IYR6 380 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 DND1Q8IYX4 353 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 GABRG1Q8N1C3 465 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 OR4K14Q8NGD5 310 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 OR5T3Q8NGG3 340 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CCDC107Q8WV48 283 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FGF13Q92913 245 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 PPP1R14AQ96A00 147 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ALG14Q96F25 216 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SLC35A4Q96G79 324 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 LURAP1Q96LR2 239 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ADAD1Q96M93 576 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CPEB1Q9BZB8 566 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TOLLIPQ9H0E2 274 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SEMA6CQ9H3T2 930 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 RGCCQ9H4X1 137 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CGGBP1Q9UFW8 167 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 VCANP13611 3396 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 DOCK6Q96HP0 2047 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SCN2AQ99250 2005 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 MYO7AQ13402 2215 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 IGLV3-16A0A075B6K0 115 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SLC5A10A0PJK1 596 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 DCDC2BA2VCK2 349 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 NEDD8-MDP1E9PL57 170 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 J3QRE1 110 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CTDSPLO15194 276 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TPT1P13693 172 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 MAPK3P27361 379 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ACTR1AP61163 376 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 IL13RA1P78552 427 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FOXO1Q12778 655 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ILF3Q12906 894 aaKnown RBP eCLIP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 PPP1R1AQ13522 171 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 IL10RAQ13651 578 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 INPP5JQ15735 1006 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 NNATQ16517 81 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 AWAT1Q58HT5 328 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 GDPD4Q6W3E5 623 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SLC35F3Q8IY50 421 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FRMD1Q8N878 549 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ZNF321PQ8N8H1 164 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 AVL9Q8NBF6 648 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ACBD4Q8NC06 268 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 OR5AP2Q8NGF4 316 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 ZCCHC10Q8TBK6 192 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FAM216AQ8WUB2 273 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 UBE2E3Q969T4 207 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TMEM106AQ96A25 262 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 FOXRED1Q96CU9 486 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 MARS2Q96GW9 593 aaKnown RBP6.86□□□□□ -1.31
HDAC9-214ENST00000441542 MS4A8Q9BY19 250 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 SMOC1Q9H4F8 434 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 TMEM27Q9HBJ8 222 aa6.86□□□□□ -1.31
HDAC9-214ENST00000441542 CMC2Q9NRP2 79 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms