RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-206	ENST00000441089	SDHA	P31040	664 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ACVR1B	P36896	505 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC6A8	P48029	635 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	GSS	P48637	474 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	PCYT1A	P49585	367 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	CLK3	P49761	638 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SUMO3	P55854	103 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SMIM11A	P58511	58 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	FXYD6P3	P58550	94 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ADARB1	P78563	741 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	EGR4	Q05215	589 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	LOXL1	Q08397	574 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	FHL1	Q13642	323 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	CBFB	Q13951	182 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	GK3P	Q14409	553 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC10A1	Q14973	349 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	RNF151	Q2KHN1	245 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	NHSL2	Q5HYW2	709 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ALG10B	Q5I7T1	473 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMEM200B	Q69YZ2	307 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TIGD3	Q6B0B8	471 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	WBP2NL	Q6ICG8	309 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	FAM166A	Q6J272	317 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	C1orf94	Q6P1W5	598 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	KLHL17	Q6TDP4	642 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF730	Q6ZMV8	503 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	DNM1P46	Q6ZS02	220 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SEM1	Q6ZVN7	128 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	MBOAT2	Q6ZWT7	520 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC46A3	Q7Z3Q1	461 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	GALNT5	Q7Z7M9	940 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ADGRG3	Q86Y34	549 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	PLCZ1	Q86YW0	608 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	NRM	Q8IXM6	262 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	PACRGL	Q8N7B6	248 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF611	Q8N823	705 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	AQP11	Q8NBQ7	271 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR2M7	Q8NG81	312 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR5M1	Q8NGP8	315 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF563	Q8TA94	476 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMEM239	Q8WW34	195 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC38A4	Q969I6	547 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	C1GALT1C1	Q96EU7	318 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SGCZ	Q96LD1	299 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	JSRP1	Q96MG2	331 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	RBM4B	Q9BQ04	359 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	MED18	Q9BUE0	208 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	PTDSS2	Q9BVG9	487 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	RBM4	Q9BWF3	364 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	DGCR6L	Q9BY27	220 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TTTY12	Q9BZ98	90 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	POLR2J2	Q9GZM3	115 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	POLR2J3	Q9H1A7	115 aa	Known RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	UBQLN3	Q9H347	655 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TOR3A	Q9H497	397 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	ANKRD19P	Q9H560	264 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SACM1L	Q9NTJ5	587 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	SMPD3	Q9NY59	655 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TUBA8	Q9NY65	449 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	CNIH4	Q9P003	139 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	VDAC3	Q9Y277	283 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	LRRC42	Q9Y546	428 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	PCDHGB5	Q9Y5G0	923 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	LIPG	Q9Y5X9	500 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	EXPH5	Q8NEV8	1989 aa		4.21	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMED7-TICAM2	A0A0A6YYA0	188 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	KDM4E	B2RXH2	506 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	LRRN3	E7EW58	273 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089		H0YJX3	145 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR10H3	O60404	316 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	NPIPB7	O75200	414 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	GLS	O94925	669 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	SNX4	O95219	450 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	SOX14	O95416	240 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	NUDT14	O95848	222 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	ADA	P00813	363 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	BGLAP	P02818	100 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089		P04436	131 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	GNAO1	P09471	354 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	IFI30	P13284	250 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	HK1	P19367	917 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	PGC	P20142	388 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	CHM	P24386	653 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	RBM34	P42696	430 aa	Known RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC1A3	P43003	542 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	MAGEA5	P43359	124 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	GPR4	P46093	362 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	GZMK	P49863	264 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	POLR2H	P52434	150 aa	Known RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	CTBP2	P56545	445 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	B3GALT5-AS1	P59052	145 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	RPP38	P78345	283 aa	Known RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	PRKCD	Q05655	676 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	CRYZ	Q08257	329 aa	Known RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	MERTK	Q12866	999 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMEM44	Q2T9K0	475 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC36A3	Q495N2	470 aa		4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	ACSF3	Q4G176	576 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC25A53	Q5H9E4	307 aa		4.2	□□□□□ -1.74

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