RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ISPDA4D126 451 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR5K3A6NET4 321 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF860A6NHJ4 632 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SAGE2PA6NJ88 616 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 C2CD4DB7Z1M9 353 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 C10orf142B7Z368 130 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 LOC110117498-PIK3R3F6TDL0 507 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MYL12BO14950 172 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SMAD9O15198 467 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 P2RX6O15547 441 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRKYO43930 277 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FGF17O60258 216 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SRPX2O60687 465 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GALR3O60755 368 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DNAJB6O75190 326 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSO75390 466 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 STX11O75558 287 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPX5O75715 221 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE7O76087 117 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 RAB36O95755 333 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 AK1P00568 194 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGLV3-19P01714 112 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 HIST1H2ABP04908 130 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATP1B1P05026 303 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 HMGN1P05114 100 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGHV4-34P06331 123 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DBIP07108 87 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GUSBP08236 651 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ADRA2AP08913 450 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE12FP0CL80 117 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE12GP0CL81 117 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE12IP0CL82 117 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 THEGLP0DJG4 465 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACP2P11117 423 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PVRP15151 417 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MYL12AP19105 171 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 NT5EP21589 574 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PSMA1P25786 263 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 NUDT1P36639 197 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OMPP47874 163 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 BCAP31P51572 246 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PSMD7P51665 324 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 LIMK1P53667 647 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 RAB38P57729 211 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 UBE2IP63279 158 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 EEF1A1P68104 462 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF45Q02386 682 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRKCDQ05655 676 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SCN1BQ07699 218 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 RAB40BQ12829 278 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MLLT11Q13015 90 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE1Q13065 139 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GAGE4Q13068 117 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SNTA1Q13424 505 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 C1DQ13901 141 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FZD2Q14332 565 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 HNF4GQ14541 408 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OXA1LQ15070 435 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPHARQ15513 63 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SSX1Q16384 188 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DUSP5Q16690 384 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF181Q2M3W8 571 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM44Q2T9K0 475 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRMT12Q53H54 448 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 EIPR1Q53HC9 387 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM31Q5JXX7 168 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ARMC4Q5T2S8 1044 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FHL5Q5TD97 284 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DHRS7BQ6IAN0 325 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM211Q6ICI0 200 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC27A4Q6P1M0 643 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM122CQ6P4D5 195 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TEX38Q6PEX7 206 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FRRS1Q6ZNA5 592 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MBOAT2Q6ZWT7 520 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 HIST3H2AQ7L7L0 130 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DGLUCYQ7Z3D6 616 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CENPVQ7Z7K6 275 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 RANBP3LQ86VV4 465 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OOSP2Q86WS3 158 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 NKAIN4Q8IVV8 208 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PEX5LQ8IYB4 626 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF595Q8IYB9 648 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDK20Q8IZL9 346 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 RNF113BQ8IZP6 322 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC22A18ASQ8N1D0 253 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF619Q8N2I2 560 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CSNK1A1LQ8N752 337 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 COX18Q8N8Q8 333 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDRT4Q8N9R6 151 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52I1Q8NGK6 324 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPR151Q8TDV0 419 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC37A2Q8TED4 501 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNE4Q8WWG9 221 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACOT11Q8WXI4 607 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PIK3R3Q92569 461 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OSTF1Q92882 214 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FGF11Q92914 225 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MSANTD3Q96H12 275 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRR1Q96L50 414 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms