RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 IGFBP4P22692 258 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 PER3P56645 1201 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 MEP1BQ16820 701 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 WDR45BQ5MNZ6 344 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 C1orf189Q5VU69 101 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 C1QL3Q5VWW1 255 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 GLT8D1Q68CQ7 371 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 MTFR2Q6P444 385 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 GLDNQ6ZMI3 551 aaPredicted RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 RABEPKQ7Z6M1 372 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 ZNF501Q96CX3 271 aaPredicted RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 SHDQ96IW2 340 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 KLHDC3Q9BQ90 382 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 OR10A4Q9H209 315 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 ZNF768Q9H5H4 540 aaKnown RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 MRPL15Q9P015 296 aaKnown RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 CKLFQ9UBR5 152 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 ELF5Q9UKW6 265 aaPredicted RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 TRAV8-7A0A075B6U6 113 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 LOC100289279A0A1B0GTE1 492 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 A0A1B0GTH9 108 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 MEGF11A6BM72 1044 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 NPIPB13A6NJU9 1138 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 NPIPB4C9JG80 1138 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 H7C417 338 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 SLC17A2O00624 439 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 ARPC1BO15143 372 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 GMFGO60234 142 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 NOS1APO75052 506 aaPredicted RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 NDUFB6O95139 128 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 IFNGR1P15260 489 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 ZNF24P17028 368 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 NAGAP17050 411 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 CXCL3P19876 107 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 FSTP19883 344 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 CSRP1P21291 193 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 APOBEC1P41238 236 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 CSNK1EP49674 416 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 DAP3P51398 398 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 CAPZA1P52907 286 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 DLX5P56178 289 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 RNF4P78317 190 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 CFHR1Q03591 330 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 GLO1Q04760 184 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 C17orf67Q0P5P2 114 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 IKZF1Q13422 519 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 CAMK2DQ13557 499 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 EIF2B1Q14232 305 aaKnown RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 ZBTB37Q5TC79 503 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 CHRDL2Q6WN34 429 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 PRSS58Q8IYP2 241 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 MFSD8Q8NHS3 518 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 DUSP19Q8WTR2 217 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 C8orf44Q96CB5 159 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 IRF2BPLQ9H1B7 796 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 CLEC4MQ9H2X3 399 aaPredicted RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
CD44-210ENST00000434472 FGF21Q9NSA1 209 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 KLK11Q9UBX7 282 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 SLC23A1Q9UHI7 598 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 DHDHQ9UQ10 334 aa9.39□□□□□ -0.91
CD44-210ENST00000434472 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SULT1C2O00338 296 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CREBL2O60519 120 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 ICMTO60725 284 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 TSC22D2O75157 780 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 PLGP00747 810 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 IFNA7P01567 189 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 HPXP02790 462 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ZNF823P16415 610 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CSF2RBP32927 897 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 VEGFCP49767 419 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 AFF3P51826 1226 aaKnown RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 MAP2K6P52564 334 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 EFNA3P52797 238 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 STARD6P59095 220 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ADAM8P78325 824 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ACY1Q03154 408 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 PRAMEF17Q5VTA0 474 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SLC25A25Q6KCM7 469 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 RHBDD2Q6NTF9 364 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 DEGS2Q6QHC5 323 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SEZ6L2Q6UXD5 910 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 NLRC3Q7RTR2 1065 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CATSPERDQ86XM0 798 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SPEM1Q8N4L4 309 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 DNAAF1Q8NEP3 725 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 BEST4Q8NFU0 473 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 OR10AC1Q8NH08 325 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 OR52N5Q8NH56 324 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 CEP76Q8TAP6 659 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 SORCS2Q96PQ0 1159 aa9.38□□□□□ -0.91
CD44-210ENST00000434472 ZNF587Q96SQ5 575 aaPredicted RBP9.38□□□□□ -0.91
CD44-210ENST00000434472 AMELYQ99218 206 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms