RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 TTC33Q6PID6 262 aaPredicted RBP12.69□□□□□ -0.38
PRKDC-203ENST00000432581 HIST3H2AQ7L7L0 130 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 SMYD1Q8NB12 490 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 C11orf65Q8NCR3 313 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 NANPQ8TBE9 248 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 HIST1H2ACQ93077 130 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 ARHGDIGQ99819 225 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 TMPRSS13Q9BYE2 586 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 SLC19A3Q9BZV2 496 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 OR51B6Q9H340 312 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 SAP30LQ9HAJ7 183 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 CCDC167Q9P0B6 97 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF229Q9UJW7 825 aa12.69□□□□□ -0.38
PRKDC-203ENST00000432581 TPD52L2O43399 206 aaKnown RBP12.68□□□□□ -0.38
PRKDC-203ENST00000432581 AVPP01185 164 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 IGHV2-5P01817 119 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 QDPRP09417 244 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF84P51523 738 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 PCBP3P57721 371 aaKnown RBP12.68□□□□□ -0.38
PRKDC-203ENST00000432581 CLRN1P58418 232 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 MAGOHP61326 146 aaKnown RBP12.68□□□□□ -0.38
PRKDC-203ENST00000432581 ERVS71-1P61550 626 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 MELKQ14680 651 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 HFEQ30201 348 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 FAM209AQ5JX71 171 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 DCAF12L2Q5VW00 463 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 USP51Q70EK9 711 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 BPIFB2Q8N4F0 458 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 RBM15BQ8NDT2 890 aaKnown RBP12.68□□□□□ -0.38
PRKDC-203ENST00000432581 RAB1CQ92928 201 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 ELMOD3Q96FG2 381 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 MPP4Q96JB8 637 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 C7orf26Q96N11 449 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
PRKDC-203ENST00000432581 CPSF4LA6NMK7 179 aaKnown RBP12.67□□□□□ -0.38
PRKDC-203ENST00000432581 CENPBD1B2RD01 187 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 APLNRP35414 380 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 HSF2Q03933 536 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 NPTX1Q15818 432 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 DUSP7Q16829 419 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 ENTPD8Q5MY95 495 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 HDDC2Q7Z4H3 204 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 ICA1LQ8NDH6 482 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
PRKDC-203ENST00000432581 OR6T1Q8NGN1 323 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 ADAMTS16Q8TE57 1224 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 SLC6A7Q99884 636 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 CPPED1Q9BRF8 314 aaPredicted RBP12.67□□□□□ -0.38
PRKDC-203ENST00000432581 CCDC28BQ9BUN5 200 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 KCNN2Q9H2S1 579 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
PRKDC-203ENST00000432581 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 MCIDASD6RGH6 385 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 KPNA4O00629 521 aaPredicted RBP12.66□□□□□ -0.38
PRKDC-203ENST00000432581 LYPD3O95274 346 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 ASAH2BP0C7U1 165 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 UMPSP11172 480 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 FPR2P25090 351 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 IDH3AP50213 366 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 ATP4BP51164 291 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF81P51508 661 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 CYP51A1Q16850 503 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 AWAT1Q58HT5 328 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 UNQ6126/PRO20091Q6UXV3 157 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 NANOGNBQ7Z5D8 188 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 PTOV1Q86YD1 416 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 TREML1Q86YW5 311 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 LRRC17Q8N6Y2 441 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 NOXO1Q8NFA2 376 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 GPR32P1Q8NGA4 272 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 OR1J1Q8NGS3 322 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 MCHR2Q969V1 340 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 TLCD1Q96CP7 247 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 GAL3ST1Q99999 423 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF426Q9BUY5 554 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 NTN4Q9HB63 628 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 DYSFO75923 2080 aa12.66□□□□□ -0.38
PRKDC-203ENST00000432581 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 M0QX08 132 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF500O60304 480 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 ERLIN1O75477 346 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 OPN1SWP03999 348 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 THY1P04216 161 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 ADRA2CP18825 462 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 GCH1P30793 250 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 DAP3P51398 398 aaKnown RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 GLO1Q04760 184 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 TSTQ16762 297 aaKnown RBP12.65□□□□□ -0.38
PRKDC-203ENST00000432581 ZNF718Q3SXZ3 478 aa12.65□□□□□ -0.38
PRKDC-203ENST00000432581 AGKQ53H12 422 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms