RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ERGIC3Q9Y282 383 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 ALPK2Q86TB3 2170 aa16.2■□□□□ 0.18
HMGN1-206ENST00000431390 SLC16A7O60669 478 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 CTLA4P16410 223 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 TTKP33981 857 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 CAMK2DQ13557 499 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 C3AR1Q16581 482 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 HIST3H3Q16695 136 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 SATL1Q86VE3 508 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 ACBD7Q8N6N7 88 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 NMD3Q96D46 503 aaKnown RBP16.19■□□□□ 0.18
HMGN1-206ENST00000431390 PSMG3-AS1Q96PY0 264 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 MND1Q9BWT6 205 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 MARCH7Q9H992 704 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 RNF122Q9H9V4 155 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 TAS2R16Q9NYV7 291 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 KLHL9Q9P2J3 617 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF175Q9Y473 711 aa16.19■□□□□ 0.18
HMGN1-206ENST00000431390 TMEM129A0AVI4 362 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 OR14I1A6ND48 311 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF99A8MXY4 864 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-206ENST00000431390 GPR171O14626 319 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 MYL12BO14950 172 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF432O94892 652 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 PTHP01270 115 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 FAM180AQ6UWF9 173 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF367Q7RTV3 350 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 NANOGP1Q8N7R0 232 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 INTS12Q96CB8 462 aaKnown RBP16.18■□□□□ 0.18
HMGN1-206ENST00000431390 OR2M2Q96R28 347 aa16.18■□□□□ 0.18
HMGN1-206ENST00000431390 SPENQ96T58 3664 aaKnown RBP16.18■□□□□ 0.18
HMGN1-206ENST00000431390 C12orf71A8MTZ7 269 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 FAM171A2A8MVW0 826 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 KHDRBS3O75525 346 aaKnown RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 MRPL3P09001 348 aaKnown RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 OR2T7P0C7T2 308 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ETV1P50549 477 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 GLO1Q04760 184 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 RAB39AQ14964 217 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 RNPS1Q15287 305 aaKnown RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 SYT6Q5T7P8 510 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 GPR141Q7Z602 305 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 TMEM123Q8N131 208 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 OR2T27Q8NH04 317 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ABHD3Q8WU67 409 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 TMEM54Q969K7 222 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 TMEM45BQ96B21 275 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 GPR137Q96N19 417 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 PRRG4Q9BZD6 226 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 RERGLQ9H628 205 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ERVK13-1Q9NX77 482 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 NDUFA13Q9P0J0 144 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 CLEC2DQ9UHP7 191 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ING1Q9UK53 422 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 A0A1B0GTH9 108 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 SMIM31A0A1B0GVY4 71 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 SEC14L2O76054 403 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 INMTO95050 263 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 LCKP06239 509 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 LIMS3P0CW19 117 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 LIMS4P0CW20 117 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 PTGS2P35354 604 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 FMODQ06828 376 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 C4orf17Q53FE4 359 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 KRTCAP3Q53RY4 240 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 HIST2H2BCQ6DN03 193 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 SLC16A9Q7RTY1 509 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ADGRE4PQ86SQ3 457 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 TIGD4Q8IY51 512 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF511Q8NB15 262 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 OR10H4Q8NGA5 316 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 OR13F1Q8NGS4 319 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 FNDC9Q8TBE3 224 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 TMIGD2Q96BF3 282 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 MNTQ99583 582 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF649Q9BS31 505 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 BCO1Q9HAY6 547 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 GLTPQ9NZD2 209 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 EMC3Q9P0I2 261 aa16.17■□□□□ 0.18
HMGN1-206ENST00000431390 LSM2Q9Y333 95 aaKnown RBP16.17■□□□□ 0.18
HMGN1-206ENST00000431390 NBPF19A0A087WUL8 3843 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 USP9YO00507 2555 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 ICE1Q9Y2F5 2266 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 DAPL1A0PJW8 107 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF724A8MTY0 619 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 SELENOFO60613 162 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 WISP2O76076 250 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 TFP02787 698 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 FCGR2AP12318 317 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 NAA10P41227 235 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 CSNK1A1P48729 337 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF133P52736 654 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 GP2P55259 537 aaKnown RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 KLRB1Q12918 225 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 GALEQ14376 348 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 ETFDHQ16134 617 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 CARD17Q5XLA6 110 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 ZNF324BQ6AW86 544 aaPredicted RBP16.16■□□□□ 0.18
HMGN1-206ENST00000431390 SLC25A47Q6Q0C1 308 aa16.16■□□□□ 0.18
HMGN1-206ENST00000431390 LYPD4Q6UWN0 246 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms